Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
DDX47Q9H0S4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
DDX47Q9H0S4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
DDX47Q9H0S4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
DDX47Q9H0S4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
DDX47Q9H0S4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
DDX47Q9H0S4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
DDX47Q9H0S4 AC142472.1-201ENST00000612013 1741 ntBASIC25.69■■□□□ 1.7
DDX47Q9H0S4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
DDX47Q9H0S4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.69■■□□□ 1.7
DDX47Q9H0S4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.69■■□□□ 1.7
DDX47Q9H0S4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
DDX47Q9H0S4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
DDX47Q9H0S4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.67■■□□□ 1.7
DDX47Q9H0S4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.67■■□□□ 1.7
DDX47Q9H0S4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.67■■□□□ 1.7
DDX47Q9H0S4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.66■■□□□ 1.7
DDX47Q9H0S4 AC110285.7-201ENST00000624417 1536 ntBASIC25.66■■□□□ 1.7
DDX47Q9H0S4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
DDX47Q9H0S4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
DDX47Q9H0S4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
DDX47Q9H0S4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
DDX47Q9H0S4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
DDX47Q9H0S4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
DDX47Q9H0S4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.65■■□□□ 1.7
DDX47Q9H0S4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
DDX47Q9H0S4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.69
DDX47Q9H0S4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
DDX47Q9H0S4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.63■■□□□ 1.69
DDX47Q9H0S4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
DDX47Q9H0S4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.63■■□□□ 1.69
DDX47Q9H0S4 MIR3665-201ENST00000578708 105 ntBASIC25.63■■□□□ 1.69
DDX47Q9H0S4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
DDX47Q9H0S4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
DDX47Q9H0S4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
DDX47Q9H0S4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.62■■□□□ 1.69
DDX47Q9H0S4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.62■■□□□ 1.69
DDX47Q9H0S4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
DDX47Q9H0S4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
DDX47Q9H0S4 WHAMMP3-201ENST00000611636 1609 ntBASIC25.62■■□□□ 1.69
DDX47Q9H0S4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.62■■□□□ 1.69
DDX47Q9H0S4 AC093323.1-202ENST00000635031 2045 ntBASIC25.61■■□□□ 1.69
DDX47Q9H0S4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
DDX47Q9H0S4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.61■■□□□ 1.69
DDX47Q9H0S4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.61■■□□□ 1.69
DDX47Q9H0S4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
DDX47Q9H0S4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
DDX47Q9H0S4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.6■■□□□ 1.69
DDX47Q9H0S4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
DDX47Q9H0S4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
DDX47Q9H0S4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
DDX47Q9H0S4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
DDX47Q9H0S4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.59■■□□□ 1.69
DDX47Q9H0S4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
DDX47Q9H0S4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
DDX47Q9H0S4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
DDX47Q9H0S4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
DDX47Q9H0S4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
DDX47Q9H0S4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
DDX47Q9H0S4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
DDX47Q9H0S4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
DDX47Q9H0S4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.58■■□□□ 1.69
DDX47Q9H0S4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
DDX47Q9H0S4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.57■■□□□ 1.68
DDX47Q9H0S4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
DDX47Q9H0S4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
DDX47Q9H0S4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
DDX47Q9H0S4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.56■■□□□ 1.68
DDX47Q9H0S4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.56■■□□□ 1.68
DDX47Q9H0S4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
DDX47Q9H0S4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.56■■□□□ 1.68
DDX47Q9H0S4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
DDX47Q9H0S4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
DDX47Q9H0S4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.56■■□□□ 1.68
DDX47Q9H0S4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.56■■□□□ 1.68
DDX47Q9H0S4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
DDX47Q9H0S4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
DDX47Q9H0S4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
DDX47Q9H0S4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
DDX47Q9H0S4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
DDX47Q9H0S4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
DDX47Q9H0S4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
DDX47Q9H0S4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.54■■□□□ 1.68
DDX47Q9H0S4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
DDX47Q9H0S4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
DDX47Q9H0S4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.53■■□□□ 1.68
DDX47Q9H0S4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
DDX47Q9H0S4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
DDX47Q9H0S4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
DDX47Q9H0S4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
DDX47Q9H0S4 ERN1-208ENST00000606895 2068 ntBASIC25.52■■□□□ 1.68
DDX47Q9H0S4 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
DDX47Q9H0S4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
DDX47Q9H0S4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.52■■□□□ 1.68
DDX47Q9H0S4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
DDX47Q9H0S4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
DDX47Q9H0S4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX47Q9H0S4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX47Q9H0S4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
DDX47Q9H0S4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms