Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
RTFDC1Q9BY42 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
RTFDC1Q9BY42 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
RTFDC1Q9BY42 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC30.61■■■□□ 2.49
RTFDC1Q9BY42 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC30.61■■■□□ 2.49
RTFDC1Q9BY42 MIR3960-201ENST00000583311 91 ntBASIC30.6■■■□□ 2.49
RTFDC1Q9BY42 BHLHE23-202ENST00000612929 1109 ntBASIC30.6■■■□□ 2.49
RTFDC1Q9BY42 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC30.59■■■□□ 2.49
RTFDC1Q9BY42 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC30.59■■■□□ 2.49
RTFDC1Q9BY42 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
RTFDC1Q9BY42 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
RTFDC1Q9BY42 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
RTFDC1Q9BY42 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
RTFDC1Q9BY42 AC103834.1-201ENST00000520383 144 ntBASIC30.57■■■□□ 2.48
RTFDC1Q9BY42 MIR6765-201ENST00000614092 87 ntBASIC30.57■■■□□ 2.48
RTFDC1Q9BY42 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RTFDC1Q9BY42 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RTFDC1Q9BY42 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC30.56■■■□□ 2.48
RTFDC1Q9BY42 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
RTFDC1Q9BY42 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
RTFDC1Q9BY42 BEX3-202ENST00000372634 753 ntTSL 2 BASIC30.55■■■□□ 2.48
RTFDC1Q9BY42 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC30.55■■■□□ 2.48
RTFDC1Q9BY42 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
RTFDC1Q9BY42 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
RTFDC1Q9BY42 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC30.55■■■□□ 2.48
RTFDC1Q9BY42 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
RTFDC1Q9BY42 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC30.54■■■□□ 2.48
RTFDC1Q9BY42 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
RTFDC1Q9BY42 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.53■■■□□ 2.48
RTFDC1Q9BY42 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
RTFDC1Q9BY42 AC009299.2-201ENST00000482477 511 ntBASIC30.53■■■□□ 2.48
RTFDC1Q9BY42 PVT1_1.1-201ENST00000615125 194 ntBASIC30.53■■■□□ 2.48
RTFDC1Q9BY42 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
RTFDC1Q9BY42 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RTFDC1Q9BY42 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
RTFDC1Q9BY42 KRT8P33-201ENST00000508125 1423 ntBASIC30.52■■■□□ 2.48
RTFDC1Q9BY42 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RTFDC1Q9BY42 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
RTFDC1Q9BY42 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RTFDC1Q9BY42 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.51■■■□□ 2.48
RTFDC1Q9BY42 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
RTFDC1Q9BY42 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC30.51■■■□□ 2.47
RTFDC1Q9BY42 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
RTFDC1Q9BY42 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC30.51■■■□□ 2.47
RTFDC1Q9BY42 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.5■■■□□ 2.47
RTFDC1Q9BY42 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
RTFDC1Q9BY42 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
RTFDC1Q9BY42 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.49■■■□□ 2.47
RTFDC1Q9BY42 AL592295.1-201ENST00000400984 884 ntBASIC30.49■■■□□ 2.47
RTFDC1Q9BY42 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC30.49■■■□□ 2.47
RTFDC1Q9BY42 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
RTFDC1Q9BY42 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC30.48■■■□□ 2.47
RTFDC1Q9BY42 AL139393.2-201ENST00000608721 2025 ntBASIC30.48■■■□□ 2.47
RTFDC1Q9BY42 AC139795.1-202ENST00000500444 432 ntBASIC30.48■■■□□ 2.47
RTFDC1Q9BY42 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
RTFDC1Q9BY42 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
RTFDC1Q9BY42 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.47■■■□□ 2.47
RTFDC1Q9BY42 AP002414.2-202ENST00000590929 1450 ntBASIC30.47■■■□□ 2.47
RTFDC1Q9BY42 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC30.47■■■□□ 2.47
RTFDC1Q9BY42 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
RTFDC1Q9BY42 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.47■■■□□ 2.47
RTFDC1Q9BY42 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
RTFDC1Q9BY42 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC30.46■■■□□ 2.47
RTFDC1Q9BY42 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC30.46■■■□□ 2.47
RTFDC1Q9BY42 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
RTFDC1Q9BY42 YBX1P4-201ENST00000392794 808 ntBASIC30.45■■■□□ 2.47
RTFDC1Q9BY42 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC30.45■■■□□ 2.47
RTFDC1Q9BY42 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC30.45■■■□□ 2.47
RTFDC1Q9BY42 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
RTFDC1Q9BY42 AC018755.3-202ENST00000596210 929 ntBASIC30.45■■■□□ 2.47
RTFDC1Q9BY42 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
RTFDC1Q9BY42 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.45■■■□□ 2.46
RTFDC1Q9BY42 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
RTFDC1Q9BY42 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC30.44■■■□□ 2.46
RTFDC1Q9BY42 HYI-210ENST00000486909 905 ntTSL 5 BASIC30.44■■■□□ 2.46
RTFDC1Q9BY42 MIR4508-201ENST00000584178 70 ntBASIC30.44■■■□□ 2.46
RTFDC1Q9BY42 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC30.44■■■□□ 2.46
RTFDC1Q9BY42 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
RTFDC1Q9BY42 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.44■■■□□ 2.46
RTFDC1Q9BY42 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
RTFDC1Q9BY42 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
RTFDC1Q9BY42 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
RTFDC1Q9BY42 HES6-204ENST00000409182 863 ntTSL 2 BASIC30.43■■■□□ 2.46
RTFDC1Q9BY42 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC30.43■■■□□ 2.46
RTFDC1Q9BY42 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
RTFDC1Q9BY42 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
RTFDC1Q9BY42 IDNK-203ENST00000405990 629 ntTSL 2 BASIC30.42■■■□□ 2.46
RTFDC1Q9BY42 ABCB10P3-201ENST00000561950 2166 ntBASIC30.42■■■□□ 2.46
RTFDC1Q9BY42 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.42■■■□□ 2.46
RTFDC1Q9BY42 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC30.41■■■□□ 2.46
RTFDC1Q9BY42 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.41■■■□□ 2.46
RTFDC1Q9BY42 ABCB10P1-201ENST00000614297 2181 ntBASIC30.41■■■□□ 2.46
RTFDC1Q9BY42 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.4■■■□□ 2.46
RTFDC1Q9BY42 IDNK-201ENST00000376417 511 ntTSL 5 BASIC30.4■■■□□ 2.46
RTFDC1Q9BY42 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
RTFDC1Q9BY42 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC30.4■■■□□ 2.46
RTFDC1Q9BY42 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
RTFDC1Q9BY42 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
RTFDC1Q9BY42 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.39■■■□□ 2.46
RTFDC1Q9BY42 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.39■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms