Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRGV9Q99603 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TRGV9Q99603 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TRGV9Q99603 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.23■□□□□ 0.67
TRGV9Q99603 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRGV9Q99603 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.22■□□□□ 0.67
TRGV9Q99603 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.22■□□□□ 0.67
TRGV9Q99603 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRGV9Q99603 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.22■□□□□ 0.67
TRGV9Q99603 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TRGV9Q99603 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.21■□□□□ 0.67
TRGV9Q99603 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.21■□□□□ 0.67
TRGV9Q99603 AC021231.2-201ENST00000594613 730 ntBASIC19.21■□□□□ 0.67
TRGV9Q99603 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRGV9Q99603 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRGV9Q99603 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRGV9Q99603 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.2■□□□□ 0.66
TRGV9Q99603 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TRGV9Q99603 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.2■□□□□ 0.66
TRGV9Q99603 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRGV9Q99603 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.2■□□□□ 0.66
TRGV9Q99603 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TRGV9Q99603 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.2■□□□□ 0.66
TRGV9Q99603 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.19■□□□□ 0.66
TRGV9Q99603 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRGV9Q99603 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRGV9Q99603 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRGV9Q99603 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.19■□□□□ 0.66
TRGV9Q99603 DUX4L29-201ENST00000425409 679 ntBASIC19.19■□□□□ 0.66
TRGV9Q99603 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRGV9Q99603 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRGV9Q99603 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRGV9Q99603 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRGV9Q99603 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRGV9Q99603 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRGV9Q99603 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TRGV9Q99603 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRGV9Q99603 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRGV9Q99603 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRGV9Q99603 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRGV9Q99603 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.18■□□□□ 0.66
TRGV9Q99603 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRGV9Q99603 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
TRGV9Q99603 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRGV9Q99603 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.17■□□□□ 0.66
TRGV9Q99603 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRGV9Q99603 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRGV9Q99603 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.16■□□□□ 0.66
TRGV9Q99603 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRGV9Q99603 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRGV9Q99603 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.15■□□□□ 0.66
TRGV9Q99603 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TRGV9Q99603 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRGV9Q99603 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRGV9Q99603 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.15■□□□□ 0.66
TRGV9Q99603 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.15■□□□□ 0.66
TRGV9Q99603 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRGV9Q99603 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRGV9Q99603 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRGV9Q99603 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRGV9Q99603 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.14■□□□□ 0.66
TRGV9Q99603 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.14■□□□□ 0.66
TRGV9Q99603 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRGV9Q99603 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRGV9Q99603 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
TRGV9Q99603 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRGV9Q99603 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TRGV9Q99603 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRGV9Q99603 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
TRGV9Q99603 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRGV9Q99603 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRGV9Q99603 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRGV9Q99603 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TRGV9Q99603 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRGV9Q99603 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRGV9Q99603 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRGV9Q99603 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRGV9Q99603 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.11■□□□□ 0.65
TRGV9Q99603 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.11■□□□□ 0.65
TRGV9Q99603 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRGV9Q99603 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.1■□□□□ 0.65
TRGV9Q99603 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRGV9Q99603 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.1■□□□□ 0.65
TRGV9Q99603 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.1■□□□□ 0.65
TRGV9Q99603 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TRGV9Q99603 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.1■□□□□ 0.65
TRGV9Q99603 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.1■□□□□ 0.65
TRGV9Q99603 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRGV9Q99603 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRGV9Q99603 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRGV9Q99603 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRGV9Q99603 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TRGV9Q99603 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRGV9Q99603 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TRGV9Q99603 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRGV9Q99603 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRGV9Q99603 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
TRGV9Q99603 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
TRGV9Q99603 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRGV9Q99603 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms