Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF2Q99496 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF2Q99496 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF2Q99496 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF2Q99496 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF2Q99496 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF2Q99496 WHAMMP2-203ENST00000563942 1603 ntBASIC19.46■□□□□ 0.71
RNF2Q99496 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF2Q99496 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF2Q99496 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RNF2Q99496 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF2Q99496 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF2Q99496 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.45■□□□□ 0.7
RNF2Q99496 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.45■□□□□ 0.7
RNF2Q99496 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.44■□□□□ 0.7
RNF2Q99496 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF2Q99496 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF2Q99496 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RNF2Q99496 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.44■□□□□ 0.7
RNF2Q99496 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF2Q99496 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF2Q99496 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF2Q99496 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF2Q99496 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF2Q99496 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RNF2Q99496 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF2Q99496 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF2Q99496 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF2Q99496 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF2Q99496 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF2Q99496 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RNF2Q99496 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
RNF2Q99496 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RNF2Q99496 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF2Q99496 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF2Q99496 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RNF2Q99496 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RNF2Q99496 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF2Q99496 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF2Q99496 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF2Q99496 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF2Q99496 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF2Q99496 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF2Q99496 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF2Q99496 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF2Q99496 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF2Q99496 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.41■□□□□ 0.7
RNF2Q99496 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RNF2Q99496 DUSP8P4-201ENST00000399538 1761 ntBASIC19.41■□□□□ 0.7
RNF2Q99496 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF2Q99496 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RNF2Q99496 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF2Q99496 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF2Q99496 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RNF2Q99496 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RNF2Q99496 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF2Q99496 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF2Q99496 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF2Q99496 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.39■□□□□ 0.69
RNF2Q99496 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF2Q99496 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.39■□□□□ 0.69
RNF2Q99496 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RNF2Q99496 AC020928.2-201ENST00000588717 2197 ntBASIC19.39■□□□□ 0.69
RNF2Q99496 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF2Q99496 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF2Q99496 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF2Q99496 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF2Q99496 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF2Q99496 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF2Q99496 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
RNF2Q99496 AC092803.2-201ENST00000564287 1899 ntBASIC19.37■□□□□ 0.69
RNF2Q99496 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF2Q99496 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF2Q99496 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF2Q99496 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RNF2Q99496 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF2Q99496 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF2Q99496 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
RNF2Q99496 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RNF2Q99496 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.36■□□□□ 0.69
RNF2Q99496 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF2Q99496 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF2Q99496 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF2Q99496 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF2Q99496 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF2Q99496 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF2Q99496 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF2Q99496 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF2Q99496 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
RNF2Q99496 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF2Q99496 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF2Q99496 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF2Q99496 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF2Q99496 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RNF2Q99496 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF2Q99496 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF2Q99496 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF2Q99496 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RNF2Q99496 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF2Q99496 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms