Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF2Q99496 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF2Q99496 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF2Q99496 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF2Q99496 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF2Q99496 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF2Q99496 WHAMMP2-203ENST00000563942 1603 ntBASIC19.46■□□□□ 0.71
RNF2Q99496 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF2Q99496 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF2Q99496 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RNF2Q99496 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF2Q99496 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF2Q99496 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.45■□□□□ 0.7
RNF2Q99496 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.45■□□□□ 0.7
RNF2Q99496 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.44■□□□□ 0.7
RNF2Q99496 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF2Q99496 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF2Q99496 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RNF2Q99496 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.44■□□□□ 0.7
RNF2Q99496 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF2Q99496 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF2Q99496 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF2Q99496 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF2Q99496 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF2Q99496 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RNF2Q99496 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF2Q99496 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF2Q99496 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF2Q99496 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF2Q99496 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF2Q99496 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RNF2Q99496 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
RNF2Q99496 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RNF2Q99496 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF2Q99496 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF2Q99496 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RNF2Q99496 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RNF2Q99496 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF2Q99496 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF2Q99496 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF2Q99496 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF2Q99496 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF2Q99496 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF2Q99496 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF2Q99496 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF2Q99496 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF2Q99496 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.41■□□□□ 0.7
RNF2Q99496 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RNF2Q99496 DUSP8P4-201ENST00000399538 1761 ntBASIC19.41■□□□□ 0.7
RNF2Q99496 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF2Q99496 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RNF2Q99496 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF2Q99496 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF2Q99496 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RNF2Q99496 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RNF2Q99496 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF2Q99496 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF2Q99496 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF2Q99496 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.39■□□□□ 0.69
RNF2Q99496 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF2Q99496 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.39■□□□□ 0.69
RNF2Q99496 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RNF2Q99496 AC020928.2-201ENST00000588717 2197 ntBASIC19.39■□□□□ 0.69
RNF2Q99496 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF2Q99496 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF2Q99496 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF2Q99496 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF2Q99496 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF2Q99496 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF2Q99496 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
RNF2Q99496 AC092803.2-201ENST00000564287 1899 ntBASIC19.37■□□□□ 0.69
RNF2Q99496 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF2Q99496 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF2Q99496 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF2Q99496 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RNF2Q99496 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF2Q99496 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF2Q99496 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
RNF2Q99496 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RNF2Q99496 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.36■□□□□ 0.69
RNF2Q99496 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF2Q99496 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF2Q99496 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF2Q99496 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF2Q99496 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF2Q99496 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF2Q99496 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF2Q99496 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF2Q99496 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
RNF2Q99496 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF2Q99496 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF2Q99496 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF2Q99496 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF2Q99496 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RNF2Q99496 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF2Q99496 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF2Q99496 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF2Q99496 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RNF2Q99496 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF2Q99496 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms