Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 NTF6A-201ENST00000591175 560 ntBASIC18.14■□□□□ 0.49
RNF183Q96D59 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RNF183Q96D59 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
RNF183Q96D59 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF183Q96D59 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF183Q96D59 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF183Q96D59 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF183Q96D59 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF183Q96D59 AC018358.1-201ENST00000631079 1402 ntBASIC18.13■□□□□ 0.49
RNF183Q96D59 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF183Q96D59 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF183Q96D59 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF183Q96D59 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF183Q96D59 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF183Q96D59 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF183Q96D59 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF183Q96D59 AL157400.5-201ENST00000507624 621 ntBASIC18.12■□□□□ 0.49
RNF183Q96D59 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF183Q96D59 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF183Q96D59 AC142086.6-201ENST00000621154 1765 ntBASIC18.12■□□□□ 0.49
RNF183Q96D59 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF183Q96D59 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF183Q96D59 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RNF183Q96D59 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.11■□□□□ 0.49
RNF183Q96D59 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.11■□□□□ 0.49
RNF183Q96D59 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF183Q96D59 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF183Q96D59 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF183Q96D59 PROC-203ENST00000409048 1586 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF183Q96D59 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF183Q96D59 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF183Q96D59 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.1■□□□□ 0.49
RNF183Q96D59 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF183Q96D59 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RNF183Q96D59 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.1■□□□□ 0.49
RNF183Q96D59 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF183Q96D59 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF183Q96D59 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF183Q96D59 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF183Q96D59 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF183Q96D59 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF183Q96D59 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF183Q96D59 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF183Q96D59 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF183Q96D59 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF183Q96D59 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF183Q96D59 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF183Q96D59 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF183Q96D59 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.07■□□□□ 0.48
RNF183Q96D59 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.07■□□□□ 0.48
RNF183Q96D59 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF183Q96D59 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF183Q96D59 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF183Q96D59 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF183Q96D59 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF183Q96D59 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RNF183Q96D59 U85056.1-201ENST00000616429 682 ntBASIC18.06■□□□□ 0.48
RNF183Q96D59 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RNF183Q96D59 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF183Q96D59 SMPD5-203ENST00000639008 1464 ntBASIC18.06■□□□□ 0.48
RNF183Q96D59 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RNF183Q96D59 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RNF183Q96D59 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF183Q96D59 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RNF183Q96D59 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF183Q96D59 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
RNF183Q96D59 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.05■□□□□ 0.48
RNF183Q96D59 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF183Q96D59 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF183Q96D59 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RNF183Q96D59 AC007029.1-201ENST00000604183 313 ntBASIC18.04■□□□□ 0.48
RNF183Q96D59 AC012354.3-201ENST00000623734 483 ntBASIC18.04■□□□□ 0.48
RNF183Q96D59 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RNF183Q96D59 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.04■□□□□ 0.48
RNF183Q96D59 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF183Q96D59 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF183Q96D59 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF183Q96D59 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF183Q96D59 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF183Q96D59 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF183Q96D59 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF183Q96D59 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF183Q96D59 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF183Q96D59 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.03■□□□□ 0.48
RNF183Q96D59 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF183Q96D59 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.02■□□□□ 0.48
RNF183Q96D59 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC18.02■□□□□ 0.47
RNF183Q96D59 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RNF183Q96D59 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF183Q96D59 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RNF183Q96D59 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF183Q96D59 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
RNF183Q96D59 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF183Q96D59 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF183Q96D59 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF183Q96D59 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF183Q96D59 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
RNF183Q96D59 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF183Q96D59 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF183Q96D59 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms