Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TRAF3IP1Q8TDR0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TRAF3IP1Q8TDR0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.66■■□□□ 1.7
TRAF3IP1Q8TDR0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
TRAF3IP1Q8TDR0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRAF3IP1Q8TDR0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.65■■□□□ 1.7
TRAF3IP1Q8TDR0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.64■■□□□ 1.7
TRAF3IP1Q8TDR0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TRAF3IP1Q8TDR0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
TRAF3IP1Q8TDR0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TRAF3IP1Q8TDR0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TRAF3IP1Q8TDR0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
TRAF3IP1Q8TDR0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TRAF3IP1Q8TDR0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
TRAF3IP1Q8TDR0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.62■■□□□ 1.69
TRAF3IP1Q8TDR0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.61■■□□□ 1.69
TRAF3IP1Q8TDR0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TRAF3IP1Q8TDR0 CR559946.2-201ENST00000623684 991 ntBASIC25.61■■□□□ 1.69
TRAF3IP1Q8TDR0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.61■■□□□ 1.69
TRAF3IP1Q8TDR0 MIR219A2-201ENST00000608502 1504 ntBASIC25.61■■□□□ 1.69
TRAF3IP1Q8TDR0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
TRAF3IP1Q8TDR0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
TRAF3IP1Q8TDR0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.61■■□□□ 1.69
TRAF3IP1Q8TDR0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TRAF3IP1Q8TDR0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.6■■□□□ 1.69
TRAF3IP1Q8TDR0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
TRAF3IP1Q8TDR0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.6■■□□□ 1.69
TRAF3IP1Q8TDR0 AC148477.6-201ENST00000623746 465 ntBASIC25.6■■□□□ 1.69
TRAF3IP1Q8TDR0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
TRAF3IP1Q8TDR0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TRAF3IP1Q8TDR0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
TRAF3IP1Q8TDR0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
TRAF3IP1Q8TDR0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
TRAF3IP1Q8TDR0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.59■■□□□ 1.69
TRAF3IP1Q8TDR0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.59■■□□□ 1.69
TRAF3IP1Q8TDR0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
TRAF3IP1Q8TDR0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
TRAF3IP1Q8TDR0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.59■■□□□ 1.69
TRAF3IP1Q8TDR0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TRAF3IP1Q8TDR0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
TRAF3IP1Q8TDR0 AC142472.1-201ENST00000612013 1741 ntBASIC25.58■■□□□ 1.69
TRAF3IP1Q8TDR0 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
TRAF3IP1Q8TDR0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.58■■□□□ 1.69
TRAF3IP1Q8TDR0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
TRAF3IP1Q8TDR0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
TRAF3IP1Q8TDR0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.57■■□□□ 1.68
TRAF3IP1Q8TDR0 HLA-V-202ENST00000446817 847 ntBASIC25.57■■□□□ 1.68
TRAF3IP1Q8TDR0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.57■■□□□ 1.68
TRAF3IP1Q8TDR0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TRAF3IP1Q8TDR0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.57■■□□□ 1.68
TRAF3IP1Q8TDR0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.57■■□□□ 1.68
TRAF3IP1Q8TDR0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.57■■□□□ 1.68
TRAF3IP1Q8TDR0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.57■■□□□ 1.68
TRAF3IP1Q8TDR0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
TRAF3IP1Q8TDR0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TRAF3IP1Q8TDR0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.56■■□□□ 1.68
TRAF3IP1Q8TDR0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TRAF3IP1Q8TDR0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TRAF3IP1Q8TDR0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TRAF3IP1Q8TDR0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TRAF3IP1Q8TDR0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
TRAF3IP1Q8TDR0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.55■■□□□ 1.68
TRAF3IP1Q8TDR0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
TRAF3IP1Q8TDR0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
TRAF3IP1Q8TDR0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.54■■□□□ 1.68
TRAF3IP1Q8TDR0 MIR3648-2-201ENST00000581792 180 ntBASIC25.54■■□□□ 1.68
TRAF3IP1Q8TDR0 MIR3648-1-201ENST00000615959 180 ntBASIC25.54■■□□□ 1.68
TRAF3IP1Q8TDR0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TRAF3IP1Q8TDR0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TRAF3IP1Q8TDR0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TRAF3IP1Q8TDR0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TRAF3IP1Q8TDR0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
TRAF3IP1Q8TDR0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
TRAF3IP1Q8TDR0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
TRAF3IP1Q8TDR0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TRAF3IP1Q8TDR0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
TRAF3IP1Q8TDR0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.51■■□□□ 1.67
TRAF3IP1Q8TDR0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
TRAF3IP1Q8TDR0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
TRAF3IP1Q8TDR0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
TRAF3IP1Q8TDR0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.5■■□□□ 1.67
TRAF3IP1Q8TDR0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.49■■□□□ 1.67
TRAF3IP1Q8TDR0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
TRAF3IP1Q8TDR0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
TRAF3IP1Q8TDR0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
TRAF3IP1Q8TDR0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.49■■□□□ 1.67
TRAF3IP1Q8TDR0 AC016575.1-201ENST00000607026 382 ntBASIC25.49■■□□□ 1.67
TRAF3IP1Q8TDR0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TRAF3IP1Q8TDR0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.48■■□□□ 1.67
TRAF3IP1Q8TDR0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
TRAF3IP1Q8TDR0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.48■■□□□ 1.67
TRAF3IP1Q8TDR0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
TRAF3IP1Q8TDR0 MIR7108-201ENST00000614319 87 ntBASIC25.48■■□□□ 1.67
TRAF3IP1Q8TDR0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TRAF3IP1Q8TDR0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TRAF3IP1Q8TDR0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TRAF3IP1Q8TDR0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.47■■□□□ 1.67
TRAF3IP1Q8TDR0 AC091060.1-201ENST00000623524 1766 ntBASIC25.47■■□□□ 1.67
TRAF3IP1Q8TDR0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.47■■□□□ 1.67
TRAF3IP1Q8TDR0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms