Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
PHC3Q8NDX5 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.55■■□□□ 1.52
PHC3Q8NDX5 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PHC3Q8NDX5 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.55■■□□□ 1.52
PHC3Q8NDX5 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
PHC3Q8NDX5 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PHC3Q8NDX5 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PHC3Q8NDX5 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PHC3Q8NDX5 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PHC3Q8NDX5 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.54■■□□□ 1.52
PHC3Q8NDX5 AL449106.1-201ENST00000608517 1980 ntBASIC24.53■■□□□ 1.52
PHC3Q8NDX5 MIR219A2-201ENST00000608502 1504 ntBASIC24.53■■□□□ 1.52
PHC3Q8NDX5 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
PHC3Q8NDX5 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PHC3Q8NDX5 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PHC3Q8NDX5 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PHC3Q8NDX5 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.53■■□□□ 1.52
PHC3Q8NDX5 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PHC3Q8NDX5 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
PHC3Q8NDX5 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.52■■□□□ 1.52
PHC3Q8NDX5 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.52■■□□□ 1.52
PHC3Q8NDX5 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
PHC3Q8NDX5 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PHC3Q8NDX5 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
PHC3Q8NDX5 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PHC3Q8NDX5 AC148477.6-201ENST00000623746 465 ntBASIC24.51■■□□□ 1.51
PHC3Q8NDX5 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PHC3Q8NDX5 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
PHC3Q8NDX5 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PHC3Q8NDX5 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
PHC3Q8NDX5 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PHC3Q8NDX5 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PHC3Q8NDX5 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PHC3Q8NDX5 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PHC3Q8NDX5 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PHC3Q8NDX5 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
PHC3Q8NDX5 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.5■■□□□ 1.51
PHC3Q8NDX5 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
PHC3Q8NDX5 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
PHC3Q8NDX5 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.5■■□□□ 1.51
PHC3Q8NDX5 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
PHC3Q8NDX5 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PHC3Q8NDX5 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PHC3Q8NDX5 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PHC3Q8NDX5 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
PHC3Q8NDX5 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.49■■□□□ 1.51
PHC3Q8NDX5 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC24.49■■□□□ 1.51
PHC3Q8NDX5 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.49■■□□□ 1.51
PHC3Q8NDX5 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PHC3Q8NDX5 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
PHC3Q8NDX5 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PHC3Q8NDX5 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
PHC3Q8NDX5 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
PHC3Q8NDX5 AC018358.1-201ENST00000631079 1402 ntBASIC24.47■■□□□ 1.51
PHC3Q8NDX5 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
PHC3Q8NDX5 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PHC3Q8NDX5 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
PHC3Q8NDX5 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PHC3Q8NDX5 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PHC3Q8NDX5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.46■■□□□ 1.51
PHC3Q8NDX5 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
PHC3Q8NDX5 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PHC3Q8NDX5 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PHC3Q8NDX5 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
PHC3Q8NDX5 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PHC3Q8NDX5 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.45■■□□□ 1.5
PHC3Q8NDX5 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.45■■□□□ 1.5
PHC3Q8NDX5 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
PHC3Q8NDX5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
PHC3Q8NDX5 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.44■■□□□ 1.5
PHC3Q8NDX5 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PHC3Q8NDX5 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PHC3Q8NDX5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
PHC3Q8NDX5 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.44■■□□□ 1.5
PHC3Q8NDX5 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PHC3Q8NDX5 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
PHC3Q8NDX5 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.43■■□□□ 1.5
PHC3Q8NDX5 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.43■■□□□ 1.5
PHC3Q8NDX5 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.43■■□□□ 1.5
PHC3Q8NDX5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PHC3Q8NDX5 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.42■■□□□ 1.5
PHC3Q8NDX5 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
PHC3Q8NDX5 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PHC3Q8NDX5 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.42■■□□□ 1.5
PHC3Q8NDX5 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
PHC3Q8NDX5 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.42■■□□□ 1.5
PHC3Q8NDX5 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PHC3Q8NDX5 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PHC3Q8NDX5 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PHC3Q8NDX5 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.41■■□□□ 1.5
PHC3Q8NDX5 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.41■■□□□ 1.5
PHC3Q8NDX5 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PHC3Q8NDX5 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PHC3Q8NDX5 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PHC3Q8NDX5 LINC01003-201ENST00000564834 1764 ntBASIC24.41■■□□□ 1.5
PHC3Q8NDX5 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.41■■□□□ 1.5
PHC3Q8NDX5 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PHC3Q8NDX5 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PHC3Q8NDX5 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PHC3Q8NDX5 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms