Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RFX6Q8HWS3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RFX6Q8HWS3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.66■■□□□ 1.7
RFX6Q8HWS3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
RFX6Q8HWS3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RFX6Q8HWS3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.66■■□□□ 1.7
RFX6Q8HWS3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RFX6Q8HWS3 AC008813.1-201ENST00000536597 885 ntBASIC25.65■■□□□ 1.7
RFX6Q8HWS3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RFX6Q8HWS3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RFX6Q8HWS3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
RFX6Q8HWS3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
RFX6Q8HWS3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.64■■□□□ 1.69
RFX6Q8HWS3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.63■■□□□ 1.69
RFX6Q8HWS3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
RFX6Q8HWS3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
RFX6Q8HWS3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RFX6Q8HWS3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.62■■□□□ 1.69
RFX6Q8HWS3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RFX6Q8HWS3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.62■■□□□ 1.69
RFX6Q8HWS3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.61■■□□□ 1.69
RFX6Q8HWS3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.61■■□□□ 1.69
RFX6Q8HWS3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
RFX6Q8HWS3 AC142472.1-201ENST00000612013 1741 ntBASIC25.61■■□□□ 1.69
RFX6Q8HWS3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.61■■□□□ 1.69
RFX6Q8HWS3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.61■■□□□ 1.69
RFX6Q8HWS3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RFX6Q8HWS3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RFX6Q8HWS3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.61■■□□□ 1.69
RFX6Q8HWS3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RFX6Q8HWS3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RFX6Q8HWS3 AC091060.1-201ENST00000623524 1766 ntBASIC25.6■■□□□ 1.69
RFX6Q8HWS3 MIR219A2-201ENST00000608502 1504 ntBASIC25.6■■□□□ 1.69
RFX6Q8HWS3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.6■■□□□ 1.69
RFX6Q8HWS3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.6■■□□□ 1.69
RFX6Q8HWS3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
RFX6Q8HWS3 HLA-V-202ENST00000446817 847 ntBASIC25.59■■□□□ 1.69
RFX6Q8HWS3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.59■■□□□ 1.69
RFX6Q8HWS3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RFX6Q8HWS3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.59■■□□□ 1.69
RFX6Q8HWS3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RFX6Q8HWS3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RFX6Q8HWS3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.58■■□□□ 1.69
RFX6Q8HWS3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
RFX6Q8HWS3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RFX6Q8HWS3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
RFX6Q8HWS3 CR559946.2-201ENST00000623684 991 ntBASIC25.57■■□□□ 1.68
RFX6Q8HWS3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.57■■□□□ 1.68
RFX6Q8HWS3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RFX6Q8HWS3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RFX6Q8HWS3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RFX6Q8HWS3 AC148477.6-201ENST00000623746 465 ntBASIC25.56■■□□□ 1.68
RFX6Q8HWS3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
RFX6Q8HWS3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
RFX6Q8HWS3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RFX6Q8HWS3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RFX6Q8HWS3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.55■■□□□ 1.68
RFX6Q8HWS3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.55■■□□□ 1.68
RFX6Q8HWS3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RFX6Q8HWS3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RFX6Q8HWS3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.54■■□□□ 1.68
RFX6Q8HWS3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RFX6Q8HWS3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RFX6Q8HWS3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
RFX6Q8HWS3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RFX6Q8HWS3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RFX6Q8HWS3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RFX6Q8HWS3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RFX6Q8HWS3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
RFX6Q8HWS3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RFX6Q8HWS3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RFX6Q8HWS3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
RFX6Q8HWS3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
RFX6Q8HWS3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
RFX6Q8HWS3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.52■■□□□ 1.68
RFX6Q8HWS3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.51■■□□□ 1.67
RFX6Q8HWS3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.51■■□□□ 1.67
RFX6Q8HWS3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RFX6Q8HWS3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.51■■□□□ 1.67
RFX6Q8HWS3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
RFX6Q8HWS3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RFX6Q8HWS3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RFX6Q8HWS3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.49■■□□□ 1.67
RFX6Q8HWS3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.49■■□□□ 1.67
RFX6Q8HWS3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RFX6Q8HWS3 MIR3648-2-201ENST00000581792 180 ntBASIC25.49■■□□□ 1.67
RFX6Q8HWS3 MIR3648-1-201ENST00000615959 180 ntBASIC25.49■■□□□ 1.67
RFX6Q8HWS3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RFX6Q8HWS3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RFX6Q8HWS3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.48■■□□□ 1.67
RFX6Q8HWS3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
RFX6Q8HWS3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.48■■□□□ 1.67
RFX6Q8HWS3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.48■■□□□ 1.67
RFX6Q8HWS3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RFX6Q8HWS3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
RFX6Q8HWS3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.48■■□□□ 1.67
RFX6Q8HWS3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
RFX6Q8HWS3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.48■■□□□ 1.67
RFX6Q8HWS3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.47■■□□□ 1.67
RFX6Q8HWS3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms