Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.15■■■□□ 2.58
UBE3BQ7Z3V4 AC025884.2-201ENST00000553429 711 ntBASIC31.15■■■□□ 2.58
UBE3BQ7Z3V4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
UBE3BQ7Z3V4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
UBE3BQ7Z3V4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
UBE3BQ7Z3V4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
UBE3BQ7Z3V4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
UBE3BQ7Z3V4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
UBE3BQ7Z3V4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.13■■■□□ 2.57
UBE3BQ7Z3V4 WHAMMP3-201ENST00000611636 1609 ntBASIC31.13■■■□□ 2.57
UBE3BQ7Z3V4 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC31.12■■■□□ 2.57
UBE3BQ7Z3V4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
UBE3BQ7Z3V4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
UBE3BQ7Z3V4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
UBE3BQ7Z3V4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
UBE3BQ7Z3V4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC31.1■■■□□ 2.57
UBE3BQ7Z3V4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
UBE3BQ7Z3V4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.09■■■□□ 2.57
UBE3BQ7Z3V4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
UBE3BQ7Z3V4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
UBE3BQ7Z3V4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
UBE3BQ7Z3V4 AC009831.1-201ENST00000580420 1582 ntBASIC31.09■■■□□ 2.57
UBE3BQ7Z3V4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
UBE3BQ7Z3V4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
UBE3BQ7Z3V4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC31.08■■■□□ 2.57
UBE3BQ7Z3V4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
UBE3BQ7Z3V4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
UBE3BQ7Z3V4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
UBE3BQ7Z3V4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC31.07■■■□□ 2.56
UBE3BQ7Z3V4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
UBE3BQ7Z3V4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
UBE3BQ7Z3V4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
UBE3BQ7Z3V4 LINC01003-201ENST00000564834 1764 ntBASIC31.07■■■□□ 2.56
UBE3BQ7Z3V4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
UBE3BQ7Z3V4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC31.06■■■□□ 2.56
UBE3BQ7Z3V4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
UBE3BQ7Z3V4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
UBE3BQ7Z3V4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
UBE3BQ7Z3V4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.06■■■□□ 2.56
UBE3BQ7Z3V4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
UBE3BQ7Z3V4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
UBE3BQ7Z3V4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC31.05■■■□□ 2.56
UBE3BQ7Z3V4 AL359504.2-201ENST00000605506 1601 ntBASIC31.05■■■□□ 2.56
UBE3BQ7Z3V4 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
UBE3BQ7Z3V4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
UBE3BQ7Z3V4 AL033527.3-201ENST00000566366 1196 ntBASIC31.04■■■□□ 2.56
UBE3BQ7Z3V4 AC133552.2-201ENST00000619106 1032 ntBASIC31.04■■■□□ 2.56
UBE3BQ7Z3V4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC31.04■■■□□ 2.56
UBE3BQ7Z3V4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.04■■■□□ 2.56
UBE3BQ7Z3V4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
UBE3BQ7Z3V4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
UBE3BQ7Z3V4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
UBE3BQ7Z3V4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
UBE3BQ7Z3V4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
UBE3BQ7Z3V4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
UBE3BQ7Z3V4 AC026202.3-201ENST00000600805 1127 ntBASIC31.03■■■□□ 2.56
UBE3BQ7Z3V4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.03■■■□□ 2.56
UBE3BQ7Z3V4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
UBE3BQ7Z3V4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
UBE3BQ7Z3V4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
UBE3BQ7Z3V4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
UBE3BQ7Z3V4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC31.01■■■□□ 2.56
UBE3BQ7Z3V4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC31.01■■■□□ 2.56
UBE3BQ7Z3V4 RP9P-202ENST00000450133 1212 ntBASIC31.01■■■□□ 2.55
UBE3BQ7Z3V4 AC093536.1-201ENST00000569153 554 ntBASIC31.01■■■□□ 2.55
UBE3BQ7Z3V4 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.01■■■□□ 2.55
UBE3BQ7Z3V4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31■■■□□ 2.55
UBE3BQ7Z3V4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
UBE3BQ7Z3V4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
UBE3BQ7Z3V4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC31■■■□□ 2.55
UBE3BQ7Z3V4 AL592293.1-201ENST00000502889 1188 ntBASIC31■■■□□ 2.55
UBE3BQ7Z3V4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC31■■■□□ 2.55
UBE3BQ7Z3V4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
UBE3BQ7Z3V4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC31■■■□□ 2.55
UBE3BQ7Z3V4 AC004987.1-201ENST00000428627 508 ntBASIC30.99■■■□□ 2.55
UBE3BQ7Z3V4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
UBE3BQ7Z3V4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
UBE3BQ7Z3V4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
UBE3BQ7Z3V4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
UBE3BQ7Z3V4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
UBE3BQ7Z3V4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
UBE3BQ7Z3V4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC30.97■■■□□ 2.55
UBE3BQ7Z3V4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
UBE3BQ7Z3V4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
UBE3BQ7Z3V4 ATP5G2P3-201ENST00000429083 425 ntBASIC30.96■■■□□ 2.55
UBE3BQ7Z3V4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC30.96■■■□□ 2.55
UBE3BQ7Z3V4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC30.96■■■□□ 2.55
UBE3BQ7Z3V4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
UBE3BQ7Z3V4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.55
UBE3BQ7Z3V4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.55
UBE3BQ7Z3V4 MIR3960-201ENST00000583311 91 ntBASIC30.95■■■□□ 2.55
UBE3BQ7Z3V4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
UBE3BQ7Z3V4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
UBE3BQ7Z3V4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
UBE3BQ7Z3V4 AL449106.1-201ENST00000608517 1980 ntBASIC30.94■■■□□ 2.54
UBE3BQ7Z3V4 TSPY13P-201ENST00000338964 914 ntBASIC30.94■■■□□ 2.54
UBE3BQ7Z3V4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC30.94■■■□□ 2.54
UBE3BQ7Z3V4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
UBE3BQ7Z3V4 RAP2CP1-202ENST00000605179 643 ntBASIC30.94■■■□□ 2.54
UBE3BQ7Z3V4 AC129492.7-201ENST00000622992 756 ntBASIC30.94■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms