Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNIP4Q6PIL6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
KCNIP4Q6PIL6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
KCNIP4Q6PIL6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNIP4Q6PIL6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KCNIP4Q6PIL6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNIP4Q6PIL6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KCNIP4Q6PIL6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.06■□□□□ 0.64
KCNIP4Q6PIL6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
KCNIP4Q6PIL6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KCNIP4Q6PIL6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.05■□□□□ 0.64
KCNIP4Q6PIL6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KCNIP4Q6PIL6 AC133561.1-201ENST00000568600 2415 ntBASIC19.05■□□□□ 0.64
KCNIP4Q6PIL6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.05■□□□□ 0.64
KCNIP4Q6PIL6 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.05■□□□□ 0.64
KCNIP4Q6PIL6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
KCNIP4Q6PIL6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.04■□□□□ 0.64
KCNIP4Q6PIL6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KCNIP4Q6PIL6 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.04■□□□□ 0.64
KCNIP4Q6PIL6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
KCNIP4Q6PIL6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KCNIP4Q6PIL6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KCNIP4Q6PIL6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
KCNIP4Q6PIL6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
KCNIP4Q6PIL6 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KCNIP4Q6PIL6 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.02■□□□□ 0.64
KCNIP4Q6PIL6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
KCNIP4Q6PIL6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
KCNIP4Q6PIL6 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
KCNIP4Q6PIL6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
KCNIP4Q6PIL6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.02■□□□□ 0.63
KCNIP4Q6PIL6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KCNIP4Q6PIL6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
KCNIP4Q6PIL6 ERN1-208ENST00000606895 2068 ntBASIC19.01■□□□□ 0.63
KCNIP4Q6PIL6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
KCNIP4Q6PIL6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.01■□□□□ 0.63
KCNIP4Q6PIL6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
KCNIP4Q6PIL6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KCNIP4Q6PIL6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
KCNIP4Q6PIL6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KCNIP4Q6PIL6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19■□□□□ 0.63
KCNIP4Q6PIL6 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19■□□□□ 0.63
KCNIP4Q6PIL6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
KCNIP4Q6PIL6 LINC00543-201ENST00000567234 1845 ntBASIC19■□□□□ 0.63
KCNIP4Q6PIL6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNIP4Q6PIL6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KCNIP4Q6PIL6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
KCNIP4Q6PIL6 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KCNIP4Q6PIL6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
KCNIP4Q6PIL6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
KCNIP4Q6PIL6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
KCNIP4Q6PIL6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KCNIP4Q6PIL6 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.98■□□□□ 0.63
KCNIP4Q6PIL6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KCNIP4Q6PIL6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.98■□□□□ 0.63
KCNIP4Q6PIL6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
KCNIP4Q6PIL6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.97■□□□□ 0.63
KCNIP4Q6PIL6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KCNIP4Q6PIL6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.97■□□□□ 0.63
KCNIP4Q6PIL6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KCNIP4Q6PIL6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.97■□□□□ 0.63
KCNIP4Q6PIL6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KCNIP4Q6PIL6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KCNIP4Q6PIL6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
KCNIP4Q6PIL6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KCNIP4Q6PIL6 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC18.96■□□□□ 0.63
KCNIP4Q6PIL6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KCNIP4Q6PIL6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KCNIP4Q6PIL6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KCNIP4Q6PIL6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
KCNIP4Q6PIL6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
KCNIP4Q6PIL6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KCNIP4Q6PIL6 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNIP4Q6PIL6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNIP4Q6PIL6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNIP4Q6PIL6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KCNIP4Q6PIL6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
KCNIP4Q6PIL6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNIP4Q6PIL6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.94■□□□□ 0.62
KCNIP4Q6PIL6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.94■□□□□ 0.62
KCNIP4Q6PIL6 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC18.94■□□□□ 0.62
KCNIP4Q6PIL6 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KCNIP4Q6PIL6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
KCNIP4Q6PIL6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KCNIP4Q6PIL6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNIP4Q6PIL6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.93■□□□□ 0.62
KCNIP4Q6PIL6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNIP4Q6PIL6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
KCNIP4Q6PIL6 PKD1P6-201ENST00000343738 4769 ntBASIC18.93■□□□□ 0.62
KCNIP4Q6PIL6 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC18.93■□□□□ 0.62
KCNIP4Q6PIL6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNIP4Q6PIL6 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
KCNIP4Q6PIL6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNIP4Q6PIL6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KCNIP4Q6PIL6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.92■□□□□ 0.62
KCNIP4Q6PIL6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNIP4Q6PIL6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.92■□□□□ 0.62
KCNIP4Q6PIL6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
KCNIP4Q6PIL6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KCNIP4Q6PIL6 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms