Protein–RNA interactions for Protein: Q6B0I6

KDM4D, Lysine-specific demethylase 4D, humanhuman

Predictions only

Length 523 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4DQ6B0I6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
KDM4DQ6B0I6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
KDM4DQ6B0I6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
KDM4DQ6B0I6 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
KDM4DQ6B0I6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
KDM4DQ6B0I6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
KDM4DQ6B0I6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC22.66■■□□□ 1.22
KDM4DQ6B0I6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
KDM4DQ6B0I6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.65■■□□□ 1.22
KDM4DQ6B0I6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC22.65■■□□□ 1.22
KDM4DQ6B0I6 CHML-205ENST00000638160 705 ntTSL 3 BASIC22.65■■□□□ 1.22
KDM4DQ6B0I6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
KDM4DQ6B0I6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
KDM4DQ6B0I6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
KDM4DQ6B0I6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
KDM4DQ6B0I6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
KDM4DQ6B0I6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
KDM4DQ6B0I6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
KDM4DQ6B0I6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KDM4DQ6B0I6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
KDM4DQ6B0I6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KDM4DQ6B0I6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
KDM4DQ6B0I6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
KDM4DQ6B0I6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC22.62■■□□□ 1.21
KDM4DQ6B0I6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
KDM4DQ6B0I6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.62■■□□□ 1.21
KDM4DQ6B0I6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.61■■□□□ 1.21
KDM4DQ6B0I6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
KDM4DQ6B0I6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
KDM4DQ6B0I6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
KDM4DQ6B0I6 AC097358.2-201ENST00000607541 1159 ntBASIC22.61■■□□□ 1.21
KDM4DQ6B0I6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.61■■□□□ 1.21
KDM4DQ6B0I6 AC108673.1-201ENST00000510422 1159 ntBASIC22.6■■□□□ 1.21
KDM4DQ6B0I6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
KDM4DQ6B0I6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
KDM4DQ6B0I6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
KDM4DQ6B0I6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.59■■□□□ 1.21
KDM4DQ6B0I6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
KDM4DQ6B0I6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
KDM4DQ6B0I6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.58■■□□□ 1.21
KDM4DQ6B0I6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
KDM4DQ6B0I6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
KDM4DQ6B0I6 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
KDM4DQ6B0I6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
KDM4DQ6B0I6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
KDM4DQ6B0I6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.57■■□□□ 1.2
KDM4DQ6B0I6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
KDM4DQ6B0I6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
KDM4DQ6B0I6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
KDM4DQ6B0I6 MIR6090-201ENST00000622481 60 ntBASIC22.57■■□□□ 1.2
KDM4DQ6B0I6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
KDM4DQ6B0I6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
KDM4DQ6B0I6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
KDM4DQ6B0I6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
KDM4DQ6B0I6 AC010501.1-201ENST00000606270 1962 ntBASIC22.55■■□□□ 1.2
KDM4DQ6B0I6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
KDM4DQ6B0I6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
KDM4DQ6B0I6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
KDM4DQ6B0I6 AC142381.3-201ENST00000568208 1670 ntBASIC22.54■■□□□ 1.2
KDM4DQ6B0I6 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
KDM4DQ6B0I6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
KDM4DQ6B0I6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
KDM4DQ6B0I6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
KDM4DQ6B0I6 WHAMMP3-201ENST00000611636 1609 ntBASIC22.53■■□□□ 1.2
KDM4DQ6B0I6 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
KDM4DQ6B0I6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
KDM4DQ6B0I6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
KDM4DQ6B0I6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.53■■□□□ 1.2
KDM4DQ6B0I6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
KDM4DQ6B0I6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.52■■□□□ 1.2
KDM4DQ6B0I6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.52■■□□□ 1.2
KDM4DQ6B0I6 AC005559.1-201ENST00000589661 871 ntBASIC22.52■■□□□ 1.2
KDM4DQ6B0I6 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
KDM4DQ6B0I6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
KDM4DQ6B0I6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.52■■□□□ 1.19
KDM4DQ6B0I6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
KDM4DQ6B0I6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
KDM4DQ6B0I6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.51■■□□□ 1.19
KDM4DQ6B0I6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
KDM4DQ6B0I6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KDM4DQ6B0I6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KDM4DQ6B0I6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.5■■□□□ 1.19
KDM4DQ6B0I6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
KDM4DQ6B0I6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KDM4DQ6B0I6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KDM4DQ6B0I6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.5■■□□□ 1.19
KDM4DQ6B0I6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KDM4DQ6B0I6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
KDM4DQ6B0I6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KDM4DQ6B0I6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
KDM4DQ6B0I6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC22.49■■□□□ 1.19
KDM4DQ6B0I6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.49■■□□□ 1.19
KDM4DQ6B0I6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
KDM4DQ6B0I6 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
KDM4DQ6B0I6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
KDM4DQ6B0I6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.47■■□□□ 1.19
KDM4DQ6B0I6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
KDM4DQ6B0I6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
KDM4DQ6B0I6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.47■■□□□ 1.19
KDM4DQ6B0I6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms