Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF20Q53R12 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.06■□□□□ 0.64
TM4SF20Q53R12 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF20Q53R12 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF20Q53R12 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TM4SF20Q53R12 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF20Q53R12 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TM4SF20Q53R12 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TM4SF20Q53R12 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.05■□□□□ 0.64
TM4SF20Q53R12 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF20Q53R12 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
TM4SF20Q53R12 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF20Q53R12 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.05■□□□□ 0.64
TM4SF20Q53R12 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF20Q53R12 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF20Q53R12 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.05■□□□□ 0.64
TM4SF20Q53R12 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF20Q53R12 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF20Q53R12 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.04■□□□□ 0.64
TM4SF20Q53R12 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.04■□□□□ 0.64
TM4SF20Q53R12 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF20Q53R12 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TM4SF20Q53R12 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF20Q53R12 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF20Q53R12 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF20Q53R12 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TM4SF20Q53R12 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TM4SF20Q53R12 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF20Q53R12 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF20Q53R12 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
TM4SF20Q53R12 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF20Q53R12 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF20Q53R12 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF20Q53R12 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF20Q53R12 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
TM4SF20Q53R12 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TM4SF20Q53R12 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF20Q53R12 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TM4SF20Q53R12 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF20Q53R12 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.01■□□□□ 0.63
TM4SF20Q53R12 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
TM4SF20Q53R12 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF20Q53R12 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.01■□□□□ 0.63
TM4SF20Q53R12 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF20Q53R12 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF20Q53R12 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TM4SF20Q53R12 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TM4SF20Q53R12 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TM4SF20Q53R12 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TM4SF20Q53R12 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19■□□□□ 0.63
TM4SF20Q53R12 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 MIR4449-201ENST00000578365 66 ntBASIC18.99■□□□□ 0.63
TM4SF20Q53R12 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF20Q53R12 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TM4SF20Q53R12 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TM4SF20Q53R12 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TM4SF20Q53R12 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.98■□□□□ 0.63
TM4SF20Q53R12 WHAMMP3-201ENST00000611636 1609 ntBASIC18.98■□□□□ 0.63
TM4SF20Q53R12 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
TM4SF20Q53R12 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.98■□□□□ 0.63
TM4SF20Q53R12 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TM4SF20Q53R12 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF20Q53R12 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF20Q53R12 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TM4SF20Q53R12 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.97■□□□□ 0.63
TM4SF20Q53R12 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TM4SF20Q53R12 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF20Q53R12 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF20Q53R12 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF20Q53R12 AL449106.1-201ENST00000608517 1980 ntBASIC18.96■□□□□ 0.63
TM4SF20Q53R12 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF20Q53R12 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF20Q53R12 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF20Q53R12 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TM4SF20Q53R12 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TM4SF20Q53R12 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TM4SF20Q53R12 AL121749.1-202ENST00000609313 2153 ntBASIC18.96■□□□□ 0.63
TM4SF20Q53R12 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC18.96■□□□□ 0.63
TM4SF20Q53R12 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF20Q53R12 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF20Q53R12 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF20Q53R12 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF20Q53R12 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF20Q53R12 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF20Q53R12 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TM4SF20Q53R12 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF20Q53R12 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms