Protein–RNA interactions for Protein: Q3ZCT1

ZNF260, Zinc finger protein 260, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260Q3ZCT1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF260Q3ZCT1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF260Q3ZCT1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF260Q3ZCT1 RPS2P35-201ENST00000443417 897 ntBASIC21■□□□□ 0.95
ZNF260Q3ZCT1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
ZNF260Q3ZCT1 AC005559.1-201ENST00000589661 871 ntBASIC21■□□□□ 0.95
ZNF260Q3ZCT1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF260Q3ZCT1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZNF260Q3ZCT1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF260Q3ZCT1 AC142472.1-201ENST00000612013 1741 ntBASIC20.99■□□□□ 0.95
ZNF260Q3ZCT1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
ZNF260Q3ZCT1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.99■□□□□ 0.95
ZNF260Q3ZCT1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.98■□□□□ 0.95
ZNF260Q3ZCT1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF260Q3ZCT1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.98■□□□□ 0.95
ZNF260Q3ZCT1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF260Q3ZCT1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF260Q3ZCT1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF260Q3ZCT1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF260Q3ZCT1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.97■□□□□ 0.95
ZNF260Q3ZCT1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.97■□□□□ 0.95
ZNF260Q3ZCT1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF260Q3ZCT1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.96■□□□□ 0.95
ZNF260Q3ZCT1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.96■□□□□ 0.95
ZNF260Q3ZCT1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF260Q3ZCT1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF260Q3ZCT1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF260Q3ZCT1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.96■□□□□ 0.95
ZNF260Q3ZCT1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF260Q3ZCT1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF260Q3ZCT1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF260Q3ZCT1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF260Q3ZCT1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
ZNF260Q3ZCT1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF260Q3ZCT1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF260Q3ZCT1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.93■□□□□ 0.94
ZNF260Q3ZCT1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF260Q3ZCT1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF260Q3ZCT1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF260Q3ZCT1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
ZNF260Q3ZCT1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF260Q3ZCT1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF260Q3ZCT1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF260Q3ZCT1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.91■□□□□ 0.94
ZNF260Q3ZCT1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.91■□□□□ 0.94
ZNF260Q3ZCT1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.91■□□□□ 0.94
ZNF260Q3ZCT1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF260Q3ZCT1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ZNF260Q3ZCT1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF260Q3ZCT1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF260Q3ZCT1 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.9■□□□□ 0.94
ZNF260Q3ZCT1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF260Q3ZCT1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.9■□□□□ 0.94
ZNF260Q3ZCT1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.9■□□□□ 0.94
ZNF260Q3ZCT1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF260Q3ZCT1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
ZNF260Q3ZCT1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF260Q3ZCT1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
ZNF260Q3ZCT1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.89■□□□□ 0.93
ZNF260Q3ZCT1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
ZNF260Q3ZCT1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF260Q3ZCT1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
ZNF260Q3ZCT1 AP006261.1-201ENST00000584783 668 ntBASIC20.88■□□□□ 0.93
ZNF260Q3ZCT1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF260Q3ZCT1 WHAMMP3-201ENST00000611636 1609 ntBASIC20.88■□□□□ 0.93
ZNF260Q3ZCT1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF260Q3ZCT1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF260Q3ZCT1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.88■□□□□ 0.93
ZNF260Q3ZCT1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.88■□□□□ 0.93
ZNF260Q3ZCT1 ERN1-208ENST00000606895 2068 ntBASIC20.87■□□□□ 0.93
ZNF260Q3ZCT1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF260Q3ZCT1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF260Q3ZCT1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF260Q3ZCT1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF260Q3ZCT1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF260Q3ZCT1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF260Q3ZCT1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ZNF260Q3ZCT1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ZNF260Q3ZCT1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ZNF260Q3ZCT1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.86■□□□□ 0.93
ZNF260Q3ZCT1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.86■□□□□ 0.93
ZNF260Q3ZCT1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF260Q3ZCT1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ZNF260Q3ZCT1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.85■□□□□ 0.93
ZNF260Q3ZCT1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF260Q3ZCT1 AL162393.1-201ENST00000437852 946 ntBASIC20.85■□□□□ 0.93
ZNF260Q3ZCT1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.85■□□□□ 0.93
ZNF260Q3ZCT1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF260Q3ZCT1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF260Q3ZCT1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF260Q3ZCT1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF260Q3ZCT1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF260Q3ZCT1 AC110285.7-201ENST00000624417 1536 ntBASIC20.83■□□□□ 0.93
ZNF260Q3ZCT1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.83■□□□□ 0.93
ZNF260Q3ZCT1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF260Q3ZCT1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ZNF260Q3ZCT1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZNF260Q3ZCT1 AC010501.1-201ENST00000606270 1962 ntBASIC20.83■□□□□ 0.92
ZNF260Q3ZCT1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
ZNF260Q3ZCT1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms