Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
PDS5AQ29RF7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
PDS5AQ29RF7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
PDS5AQ29RF7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC30.06■■■□□ 2.4
PDS5AQ29RF7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
PDS5AQ29RF7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
PDS5AQ29RF7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
PDS5AQ29RF7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.06■■■□□ 2.4
PDS5AQ29RF7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC30.06■■■□□ 2.4
PDS5AQ29RF7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
PDS5AQ29RF7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
PDS5AQ29RF7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC30.05■■■□□ 2.4
PDS5AQ29RF7 RP9P-202ENST00000450133 1212 ntBASIC30.04■■■□□ 2.4
PDS5AQ29RF7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC30.04■■■□□ 2.4
PDS5AQ29RF7 AC026202.3-201ENST00000600805 1127 ntBASIC30.03■■■□□ 2.4
PDS5AQ29RF7 AC139426.1-201ENST00000568218 2529 ntBASIC30.03■■■□□ 2.4
PDS5AQ29RF7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
PDS5AQ29RF7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
PDS5AQ29RF7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
PDS5AQ29RF7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC30.02■■■□□ 2.4
PDS5AQ29RF7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
PDS5AQ29RF7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
PDS5AQ29RF7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.4
PDS5AQ29RF7 MIR3960-201ENST00000583311 91 ntBASIC30.01■■■□□ 2.4
PDS5AQ29RF7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC30■■■□□ 2.39
PDS5AQ29RF7 RAP2CP1-202ENST00000605179 643 ntBASIC30■■■□□ 2.39
PDS5AQ29RF7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC30■■■□□ 2.39
PDS5AQ29RF7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC30■■■□□ 2.39
PDS5AQ29RF7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
PDS5AQ29RF7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
PDS5AQ29RF7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
PDS5AQ29RF7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
PDS5AQ29RF7 HES4-204ENST00000484667 667 ntTSL 3 BASIC29.99■■■□□ 2.39
PDS5AQ29RF7 AC133552.2-201ENST00000619106 1032 ntBASIC29.99■■■□□ 2.39
PDS5AQ29RF7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC29.99■■■□□ 2.39
PDS5AQ29RF7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
PDS5AQ29RF7 AC093536.1-201ENST00000569153 554 ntBASIC29.98■■■□□ 2.39
PDS5AQ29RF7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
PDS5AQ29RF7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
PDS5AQ29RF7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC29.98■■■□□ 2.39
PDS5AQ29RF7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC29.98■■■□□ 2.39
PDS5AQ29RF7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
PDS5AQ29RF7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC29.97■■■□□ 2.39
PDS5AQ29RF7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
PDS5AQ29RF7 AL359504.2-201ENST00000605506 1601 ntBASIC29.97■■■□□ 2.39
PDS5AQ29RF7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC29.97■■■□□ 2.39
PDS5AQ29RF7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
PDS5AQ29RF7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
PDS5AQ29RF7 LINC01003-201ENST00000564834 1764 ntBASIC29.97■■■□□ 2.39
PDS5AQ29RF7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC29.97■■■□□ 2.39
PDS5AQ29RF7 AL592293.1-201ENST00000502889 1188 ntBASIC29.96■■■□□ 2.39
PDS5AQ29RF7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
PDS5AQ29RF7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC29.96■■■□□ 2.39
PDS5AQ29RF7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC29.96■■■□□ 2.39
PDS5AQ29RF7 TSPY13P-201ENST00000338964 914 ntBASIC29.96■■■□□ 2.39
PDS5AQ29RF7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
PDS5AQ29RF7 AC004987.1-201ENST00000428627 508 ntBASIC29.95■■■□□ 2.38
PDS5AQ29RF7 ATP5G2P3-201ENST00000429083 425 ntBASIC29.95■■■□□ 2.38
PDS5AQ29RF7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.38
PDS5AQ29RF7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
PDS5AQ29RF7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
PDS5AQ29RF7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
PDS5AQ29RF7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC29.94■■■□□ 2.38
PDS5AQ29RF7 AC129492.7-201ENST00000622992 756 ntBASIC29.94■■■□□ 2.38
PDS5AQ29RF7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
PDS5AQ29RF7 AL033527.3-201ENST00000566366 1196 ntBASIC29.93■■■□□ 2.38
PDS5AQ29RF7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC29.92■■■□□ 2.38
PDS5AQ29RF7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC29.92■■■□□ 2.38
PDS5AQ29RF7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC29.92■■■□□ 2.38
PDS5AQ29RF7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC29.92■■■□□ 2.38
PDS5AQ29RF7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC29.92■■■□□ 2.38
PDS5AQ29RF7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
PDS5AQ29RF7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
PDS5AQ29RF7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
PDS5AQ29RF7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.9■■■□□ 2.38
PDS5AQ29RF7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
PDS5AQ29RF7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC29.9■■■□□ 2.38
PDS5AQ29RF7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
PDS5AQ29RF7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC29.9■■■□□ 2.38
PDS5AQ29RF7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC29.9■■■□□ 2.38
PDS5AQ29RF7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
PDS5AQ29RF7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC29.89■■■□□ 2.38
PDS5AQ29RF7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.38
PDS5AQ29RF7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC29.88■■■□□ 2.37
PDS5AQ29RF7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
PDS5AQ29RF7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
PDS5AQ29RF7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
PDS5AQ29RF7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
PDS5AQ29RF7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC29.86■■■□□ 2.37
PDS5AQ29RF7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
PDS5AQ29RF7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
PDS5AQ29RF7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
PDS5AQ29RF7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC29.86■■■□□ 2.37
PDS5AQ29RF7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC29.86■■■□□ 2.37
PDS5AQ29RF7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC29.86■■■□□ 2.37
PDS5AQ29RF7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC29.86■■■□□ 2.37
PDS5AQ29RF7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC29.85■■■□□ 2.37
PDS5AQ29RF7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC29.85■■■□□ 2.37
PDS5AQ29RF7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC29.85■■■□□ 2.37
PDS5AQ29RF7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms