Protein–RNA interactions for Protein: P62979

RPS27A, Ubiquitin-40S ribosomal protein S27a, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27AP62979 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.16■□□□□ 0.98
RPS27AP62979 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPS27AP62979 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPS27AP62979 AP004609.3-201ENST00000610705 1884 ntBASIC21.15■□□□□ 0.98
RPS27AP62979 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPS27AP62979 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPS27AP62979 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RPS27AP62979 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPS27AP62979 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.15■□□□□ 0.98
RPS27AP62979 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPS27AP62979 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPS27AP62979 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPS27AP62979 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
RPS27AP62979 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
RPS27AP62979 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPS27AP62979 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.13■□□□□ 0.97
RPS27AP62979 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RPS27AP62979 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPS27AP62979 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPS27AP62979 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.12■□□□□ 0.97
RPS27AP62979 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPS27AP62979 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPS27AP62979 AC092803.2-201ENST00000564287 1899 ntBASIC21.11■□□□□ 0.97
RPS27AP62979 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPS27AP62979 DUSP8P4-201ENST00000399538 1761 ntBASIC21.11■□□□□ 0.97
RPS27AP62979 AC020928.2-201ENST00000588717 2197 ntBASIC21.11■□□□□ 0.97
RPS27AP62979 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPS27AP62979 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RPS27AP62979 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.1■□□□□ 0.97
RPS27AP62979 AP006261.1-201ENST00000584783 668 ntBASIC21.1■□□□□ 0.97
RPS27AP62979 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RPS27AP62979 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.09■□□□□ 0.97
RPS27AP62979 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RPS27AP62979 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RPS27AP62979 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.09■□□□□ 0.97
RPS27AP62979 AC110285.7-201ENST00000624417 1536 ntBASIC21.09■□□□□ 0.97
RPS27AP62979 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPS27AP62979 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPS27AP62979 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RPS27AP62979 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.08■□□□□ 0.96
RPS27AP62979 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.07■□□□□ 0.96
RPS27AP62979 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RPS27AP62979 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.07■□□□□ 0.96
RPS27AP62979 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPS27AP62979 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.06■□□□□ 0.96
RPS27AP62979 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPS27AP62979 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RPS27AP62979 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.06■□□□□ 0.96
RPS27AP62979 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
RPS27AP62979 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
RPS27AP62979 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPS27AP62979 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPS27AP62979 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.05■□□□□ 0.96
RPS27AP62979 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPS27AP62979 AC142472.1-201ENST00000612013 1741 ntBASIC21.05■□□□□ 0.96
RPS27AP62979 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPS27AP62979 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RPS27AP62979 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPS27AP62979 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPS27AP62979 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RPS27AP62979 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPS27AP62979 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPS27AP62979 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPS27AP62979 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPS27AP62979 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPS27AP62979 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPS27AP62979 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.03■□□□□ 0.96
RPS27AP62979 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPS27AP62979 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RPS27AP62979 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPS27AP62979 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.03■□□□□ 0.96
RPS27AP62979 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RPS27AP62979 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RPS27AP62979 AC087741.3-201ENST00000624270 1347 ntBASIC21.03■□□□□ 0.96
RPS27AP62979 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RPS27AP62979 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPS27AP62979 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.02■□□□□ 0.95
RPS27AP62979 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPS27AP62979 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.01■□□□□ 0.95
RPS27AP62979 WHAMMP3-201ENST00000611636 1609 ntBASIC21.01■□□□□ 0.95
RPS27AP62979 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPS27AP62979 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPS27AP62979 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPS27AP62979 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPS27AP62979 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPS27AP62979 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RPS27AP62979 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21■□□□□ 0.95
RPS27AP62979 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
RPS27AP62979 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPS27AP62979 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPS27AP62979 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21■□□□□ 0.95
RPS27AP62979 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RPS27AP62979 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
RPS27AP62979 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPS27AP62979 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPS27AP62979 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPS27AP62979 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RPS27AP62979 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPS27AP62979 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPS27AP62979 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms