Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.96■■□□□ 1.11
SLC25A1P53007 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC25A1P53007 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC25A1P53007 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.95■■□□□ 1.1
SLC25A1P53007 LINC01971-201ENST00000617888 1048 ntBASIC21.95■■□□□ 1.1
SLC25A1P53007 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.95■■□□□ 1.1
SLC25A1P53007 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC25A1P53007 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.95■■□□□ 1.1
SLC25A1P53007 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.95■■□□□ 1.1
SLC25A1P53007 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC25A1P53007 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SLC25A1P53007 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC25A1P53007 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.94■■□□□ 1.1
SLC25A1P53007 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC25A1P53007 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SLC25A1P53007 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SLC25A1P53007 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SLC25A1P53007 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC25A1P53007 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SLC25A1P53007 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
SLC25A1P53007 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC25A1P53007 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC25A1P53007 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
SLC25A1P53007 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC25A1P53007 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.92■■□□□ 1.1
SLC25A1P53007 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC25A1P53007 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
SLC25A1P53007 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SLC25A1P53007 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC25A1P53007 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC25A1P53007 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SLC25A1P53007 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC25A1P53007 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC25A1P53007 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SLC25A1P53007 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SLC25A1P53007 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SLC25A1P53007 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SLC25A1P53007 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC25A1P53007 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC25A1P53007 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SLC25A1P53007 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.9■■□□□ 1.1
SLC25A1P53007 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.9■■□□□ 1.1
SLC25A1P53007 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.89■■□□□ 1.1
SLC25A1P53007 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SLC25A1P53007 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC25A1P53007 AC020928.2-201ENST00000588717 2197 ntBASIC21.89■■□□□ 1.09
SLC25A1P53007 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.89■■□□□ 1.09
SLC25A1P53007 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SLC25A1P53007 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SLC25A1P53007 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC25A1P53007 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC25A1P53007 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SLC25A1P53007 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SLC25A1P53007 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.88■■□□□ 1.09
SLC25A1P53007 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SLC25A1P53007 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.88■■□□□ 1.09
SLC25A1P53007 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SLC25A1P53007 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC25A1P53007 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
SLC25A1P53007 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.88■■□□□ 1.09
SLC25A1P53007 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC25A1P53007 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
SLC25A1P53007 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.87■■□□□ 1.09
SLC25A1P53007 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.87■■□□□ 1.09
SLC25A1P53007 DUX4L13-201ENST00000554103 1267 ntBASIC21.87■■□□□ 1.09
SLC25A1P53007 DUX4L15-201ENST00000611059 1267 ntBASIC21.87■■□□□ 1.09
SLC25A1P53007 DUX4L23-201ENST00000615195 1269 ntBASIC21.87■■□□□ 1.09
SLC25A1P53007 DUX4L24-201ENST00000617576 1269 ntBASIC21.87■■□□□ 1.09
SLC25A1P53007 DUX4L22-201ENST00000618238 1269 ntBASIC21.87■■□□□ 1.09
SLC25A1P53007 DUX4L20-201ENST00000619712 1269 ntBASIC21.87■■□□□ 1.09
SLC25A1P53007 DUX4L21-201ENST00000622058 1269 ntBASIC21.87■■□□□ 1.09
SLC25A1P53007 DUX4L10-201ENST00000622460 1267 ntBASIC21.87■■□□□ 1.09
SLC25A1P53007 DUX4L25-201ENST00000624915 1269 ntBASIC21.87■■□□□ 1.09
SLC25A1P53007 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC25A1P53007 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC25A1P53007 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SLC25A1P53007 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC25A1P53007 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLC25A1P53007 AC008813.1-201ENST00000536597 885 ntBASIC21.86■■□□□ 1.09
SLC25A1P53007 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLC25A1P53007 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
SLC25A1P53007 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SLC25A1P53007 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SLC25A1P53007 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.85■■□□□ 1.09
SLC25A1P53007 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.85■■□□□ 1.09
SLC25A1P53007 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.85■■□□□ 1.09
SLC25A1P53007 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.85■■□□□ 1.09
SLC25A1P53007 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
SLC25A1P53007 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SLC25A1P53007 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.84■■□□□ 1.09
SLC25A1P53007 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SLC25A1P53007 RPS2P35-201ENST00000443417 897 ntBASIC21.84■■□□□ 1.09
SLC25A1P53007 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SLC25A1P53007 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SLC25A1P53007 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
SLC25A1P53007 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.83■■□□□ 1.09
SLC25A1P53007 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SLC25A1P53007 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC25A1P53007 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SLC25A1P53007 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms