Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 DUX4L14-201ENST00000621227 1267 ntBASIC23.36■■□□□ 1.33
PRIM2P49643 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.36■■□□□ 1.33
PRIM2P49643 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.36■■□□□ 1.33
PRIM2P49643 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
PRIM2P49643 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PRIM2P49643 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.35■■□□□ 1.33
PRIM2P49643 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PRIM2P49643 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PRIM2P49643 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PRIM2P49643 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PRIM2P49643 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PRIM2P49643 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.34■■□□□ 1.33
PRIM2P49643 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PRIM2P49643 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.34■■□□□ 1.33
PRIM2P49643 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PRIM2P49643 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PRIM2P49643 AL449106.1-201ENST00000608517 1980 ntBASIC23.33■■□□□ 1.33
PRIM2P49643 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PRIM2P49643 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PRIM2P49643 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PRIM2P49643 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
PRIM2P49643 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.33■■□□□ 1.32
PRIM2P49643 ABHD17AP4-201ENST00000411545 909 ntBASIC23.32■■□□□ 1.32
PRIM2P49643 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
PRIM2P49643 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PRIM2P49643 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.31■■□□□ 1.32
PRIM2P49643 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PRIM2P49643 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.31■■□□□ 1.32
PRIM2P49643 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PRIM2P49643 AC091060.1-201ENST00000623524 1766 ntBASIC23.3■■□□□ 1.32
PRIM2P49643 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.3■■□□□ 1.32
PRIM2P49643 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PRIM2P49643 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PRIM2P49643 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
PRIM2P49643 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PRIM2P49643 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.28■■□□□ 1.32
PRIM2P49643 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.27■■□□□ 1.32
PRIM2P49643 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PRIM2P49643 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.27■■□□□ 1.32
PRIM2P49643 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.27■■□□□ 1.32
PRIM2P49643 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
PRIM2P49643 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
PRIM2P49643 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PRIM2P49643 AP004609.3-201ENST00000610705 1884 ntBASIC23.26■■□□□ 1.31
PRIM2P49643 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PRIM2P49643 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PRIM2P49643 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
PRIM2P49643 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.26■■□□□ 1.31
PRIM2P49643 AC008813.1-201ENST00000536597 885 ntBASIC23.26■■□□□ 1.31
PRIM2P49643 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.26■■□□□ 1.31
PRIM2P49643 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
PRIM2P49643 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PRIM2P49643 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.25■■□□□ 1.31
PRIM2P49643 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.25■■□□□ 1.31
PRIM2P49643 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PRIM2P49643 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
PRIM2P49643 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.24■■□□□ 1.31
PRIM2P49643 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
PRIM2P49643 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PRIM2P49643 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PRIM2P49643 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
PRIM2P49643 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.24■■□□□ 1.31
PRIM2P49643 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PRIM2P49643 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.23■■□□□ 1.31
PRIM2P49643 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.23■■□□□ 1.31
PRIM2P49643 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PRIM2P49643 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PRIM2P49643 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PRIM2P49643 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PRIM2P49643 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PRIM2P49643 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRIM2P49643 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRIM2P49643 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PRIM2P49643 AC145676.1-201ENST00000514988 2004 ntBASIC23.21■■□□□ 1.31
PRIM2P49643 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PRIM2P49643 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PRIM2P49643 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
PRIM2P49643 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PRIM2P49643 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.19■■□□□ 1.3
PRIM2P49643 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRIM2P49643 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
PRIM2P49643 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.19■■□□□ 1.3
PRIM2P49643 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PRIM2P49643 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PRIM2P49643 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
PRIM2P49643 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PRIM2P49643 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRIM2P49643 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PRIM2P49643 WHAMMP3-201ENST00000611636 1609 ntBASIC23.17■■□□□ 1.3
PRIM2P49643 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PRIM2P49643 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.17■■□□□ 1.3
PRIM2P49643 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
PRIM2P49643 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PRIM2P49643 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.16■■□□□ 1.3
PRIM2P49643 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
PRIM2P49643 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRIM2P49643 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.16■■□□□ 1.3
PRIM2P49643 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.16■■□□□ 1.3
PRIM2P49643 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
PRIM2P49643 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms