Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.74■■□□□ 1.07
SRP9P49458 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
SRP9P49458 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRP9P49458 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SRP9P49458 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SRP9P49458 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.74■■□□□ 1.07
SRP9P49458 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.73■■□□□ 1.07
SRP9P49458 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRP9P49458 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRP9P49458 DUX4L11-201ENST00000611504 1267 ntBASIC21.73■■□□□ 1.07
SRP9P49458 DUX4L12-201ENST00000614593 1267 ntBASIC21.73■■□□□ 1.07
SRP9P49458 DUX4L14-201ENST00000621227 1267 ntBASIC21.73■■□□□ 1.07
SRP9P49458 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.73■■□□□ 1.07
SRP9P49458 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SRP9P49458 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRP9P49458 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.72■■□□□ 1.07
SRP9P49458 AC145676.1-201ENST00000514988 2004 ntBASIC21.72■■□□□ 1.07
SRP9P49458 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRP9P49458 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.72■■□□□ 1.07
SRP9P49458 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SRP9P49458 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.71■■□□□ 1.07
SRP9P49458 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SRP9P49458 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.7■■□□□ 1.07
SRP9P49458 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SRP9P49458 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SRP9P49458 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.7■■□□□ 1.06
SRP9P49458 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.7■■□□□ 1.06
SRP9P49458 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.7■■□□□ 1.06
SRP9P49458 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.7■■□□□ 1.06
SRP9P49458 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SRP9P49458 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SRP9P49458 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.69■■□□□ 1.06
SRP9P49458 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.69■■□□□ 1.06
SRP9P49458 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.69■■□□□ 1.06
SRP9P49458 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SRP9P49458 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.68■■□□□ 1.06
SRP9P49458 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.68■■□□□ 1.06
SRP9P49458 DUX4L13-201ENST00000554103 1267 ntBASIC21.68■■□□□ 1.06
SRP9P49458 DUX4L15-201ENST00000611059 1267 ntBASIC21.68■■□□□ 1.06
SRP9P49458 DUX4L23-201ENST00000615195 1269 ntBASIC21.68■■□□□ 1.06
SRP9P49458 DUX4L24-201ENST00000617576 1269 ntBASIC21.68■■□□□ 1.06
SRP9P49458 DUX4L22-201ENST00000618238 1269 ntBASIC21.68■■□□□ 1.06
SRP9P49458 DUX4L20-201ENST00000619712 1269 ntBASIC21.68■■□□□ 1.06
SRP9P49458 DUX4L21-201ENST00000622058 1269 ntBASIC21.68■■□□□ 1.06
SRP9P49458 DUX4L10-201ENST00000622460 1267 ntBASIC21.68■■□□□ 1.06
SRP9P49458 DUX4L25-201ENST00000624915 1269 ntBASIC21.68■■□□□ 1.06
SRP9P49458 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
SRP9P49458 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SRP9P49458 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRP9P49458 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.67■■□□□ 1.06
SRP9P49458 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRP9P49458 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SRP9P49458 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
SRP9P49458 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SRP9P49458 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.66■■□□□ 1.06
SRP9P49458 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRP9P49458 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRP9P49458 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRP9P49458 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.66■■□□□ 1.06
SRP9P49458 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SRP9P49458 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SRP9P49458 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.66■■□□□ 1.06
SRP9P49458 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SRP9P49458 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SRP9P49458 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SRP9P49458 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SRP9P49458 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SRP9P49458 AC100797.4-201ENST00000631653 1827 ntBASIC21.64■■□□□ 1.06
SRP9P49458 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
SRP9P49458 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.64■■□□□ 1.05
SRP9P49458 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SRP9P49458 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SRP9P49458 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SRP9P49458 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SRP9P49458 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SRP9P49458 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.63■■□□□ 1.05
SRP9P49458 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.63■■□□□ 1.05
SRP9P49458 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.63■■□□□ 1.05
SRP9P49458 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
SRP9P49458 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SRP9P49458 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.62■■□□□ 1.05
SRP9P49458 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SRP9P49458 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SRP9P49458 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.62■■□□□ 1.05
SRP9P49458 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SRP9P49458 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SRP9P49458 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SRP9P49458 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SRP9P49458 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SRP9P49458 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SRP9P49458 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.61■■□□□ 1.05
SRP9P49458 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SRP9P49458 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRP9P49458 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
SRP9P49458 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.6■■□□□ 1.05
SRP9P49458 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.6■■□□□ 1.05
SRP9P49458 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SRP9P49458 AC110285.7-201ENST00000624417 1536 ntBASIC21.6■■□□□ 1.05
SRP9P49458 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SRP9P49458 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms