Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SLC6A12P48065 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
SLC6A12P48065 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SLC6A12P48065 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SLC6A12P48065 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SLC6A12P48065 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
SLC6A12P48065 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SLC6A12P48065 AC142472.1-201ENST00000612013 1741 ntBASIC24.01■■□□□ 1.43
SLC6A12P48065 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
SLC6A12P48065 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
SLC6A12P48065 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.99■■□□□ 1.43
SLC6A12P48065 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.99■■□□□ 1.43
SLC6A12P48065 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SLC6A12P48065 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SLC6A12P48065 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SLC6A12P48065 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.99■■□□□ 1.43
SLC6A12P48065 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SLC6A12P48065 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SLC6A12P48065 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SLC6A12P48065 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.98■■□□□ 1.43
SLC6A12P48065 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SLC6A12P48065 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SLC6A12P48065 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.98■■□□□ 1.43
SLC6A12P48065 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.97■■□□□ 1.43
SLC6A12P48065 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SLC6A12P48065 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.96■■□□□ 1.43
SLC6A12P48065 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SLC6A12P48065 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SLC6A12P48065 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SLC6A12P48065 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
SLC6A12P48065 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.96■■□□□ 1.43
SLC6A12P48065 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SLC6A12P48065 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.95■■□□□ 1.42
SLC6A12P48065 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.95■■□□□ 1.42
SLC6A12P48065 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.95■■□□□ 1.42
SLC6A12P48065 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.94■■□□□ 1.42
SLC6A12P48065 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
SLC6A12P48065 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
SLC6A12P48065 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.94■■□□□ 1.42
SLC6A12P48065 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
SLC6A12P48065 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.94■■□□□ 1.42
SLC6A12P48065 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SLC6A12P48065 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.93■■□□□ 1.42
SLC6A12P48065 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.93■■□□□ 1.42
SLC6A12P48065 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SLC6A12P48065 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SLC6A12P48065 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
SLC6A12P48065 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.93■■□□□ 1.42
SLC6A12P48065 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SLC6A12P48065 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.93■■□□□ 1.42
SLC6A12P48065 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SLC6A12P48065 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SLC6A12P48065 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.92■■□□□ 1.42
SLC6A12P48065 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SLC6A12P48065 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SLC6A12P48065 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SLC6A12P48065 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.92■■□□□ 1.42
SLC6A12P48065 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SLC6A12P48065 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.92■■□□□ 1.42
SLC6A12P48065 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.91■■□□□ 1.42
SLC6A12P48065 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.91■■□□□ 1.42
SLC6A12P48065 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
SLC6A12P48065 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SLC6A12P48065 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.91■■□□□ 1.42
SLC6A12P48065 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SLC6A12P48065 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SLC6A12P48065 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
SLC6A12P48065 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
SLC6A12P48065 AL359258.2-201ENST00000564063 1566 ntBASIC23.9■■□□□ 1.42
SLC6A12P48065 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.9■■□□□ 1.42
SLC6A12P48065 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
SLC6A12P48065 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SLC6A12P48065 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.88■■□□□ 1.41
SLC6A12P48065 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.88■■□□□ 1.41
SLC6A12P48065 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SLC6A12P48065 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.88■■□□□ 1.41
SLC6A12P48065 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SLC6A12P48065 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.87■■□□□ 1.41
SLC6A12P48065 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.87■■□□□ 1.41
SLC6A12P48065 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SLC6A12P48065 AC091060.1-201ENST00000623524 1766 ntBASIC23.86■■□□□ 1.41
SLC6A12P48065 MIR639-201ENST00000384974 98 ntBASIC23.86■■□□□ 1.41
SLC6A12P48065 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.86■■□□□ 1.41
SLC6A12P48065 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
SLC6A12P48065 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
SLC6A12P48065 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SLC6A12P48065 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
SLC6A12P48065 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SLC6A12P48065 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
SLC6A12P48065 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SLC6A12P48065 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SLC6A12P48065 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.83■■□□□ 1.41
SLC6A12P48065 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.83■■□□□ 1.41
SLC6A12P48065 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SLC6A12P48065 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
SLC6A12P48065 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
SLC6A12P48065 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SLC6A12P48065 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC6A12P48065 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.82■■□□□ 1.4
SLC6A12P48065 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms