Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.8■□□□□ 0.92
CXCL3P19876 AC127502.1-201ENST00000399971 1502 ntBASIC20.8■□□□□ 0.92
CXCL3P19876 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CXCL3P19876 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CXCL3P19876 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CXCL3P19876 AL139125.2-201ENST00000623134 1869 ntBASIC20.79■□□□□ 0.92
CXCL3P19876 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CXCL3P19876 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CXCL3P19876 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CXCL3P19876 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CXCL3P19876 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CXCL3P19876 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CXCL3P19876 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CXCL3P19876 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CXCL3P19876 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.78■□□□□ 0.92
CXCL3P19876 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CXCL3P19876 AC142381.3-201ENST00000568208 1670 ntBASIC20.77■□□□□ 0.92
CXCL3P19876 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CXCL3P19876 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.91
CXCL3P19876 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXCL3P19876 AC068473.5-201ENST00000616428 2072 ntBASIC20.76■□□□□ 0.91
CXCL3P19876 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXCL3P19876 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXCL3P19876 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXCL3P19876 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CXCL3P19876 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXCL3P19876 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CXCL3P19876 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CXCL3P19876 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CXCL3P19876 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CXCL3P19876 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CXCL3P19876 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CXCL3P19876 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.75■□□□□ 0.91
CXCL3P19876 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CXCL3P19876 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CXCL3P19876 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CXCL3P19876 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CXCL3P19876 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CXCL3P19876 DYNLL1-208ENST00000550178 581 ntBASIC20.74■□□□□ 0.91
CXCL3P19876 CLDN5-201ENST00000403084 2357 ntBASIC20.74■□□□□ 0.91
CXCL3P19876 LINC00543-201ENST00000567234 1845 ntBASIC20.74■□□□□ 0.91
CXCL3P19876 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CXCL3P19876 AC079834.2-201ENST00000609776 1949 ntBASIC20.73■□□□□ 0.91
CXCL3P19876 AC018358.1-201ENST00000631079 1402 ntBASIC20.73■□□□□ 0.91
CXCL3P19876 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CXCL3P19876 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CXCL3P19876 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CXCL3P19876 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CXCL3P19876 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CXCL3P19876 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXCL3P19876 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXCL3P19876 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CXCL3P19876 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CXCL3P19876 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CXCL3P19876 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
CXCL3P19876 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CXCL3P19876 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CXCL3P19876 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CXCL3P19876 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CXCL3P19876 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
CXCL3P19876 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CXCL3P19876 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.7■□□□□ 0.9
CXCL3P19876 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CXCL3P19876 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CXCL3P19876 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CXCL3P19876 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CXCL3P19876 AC138932.3-201ENST00000567634 1902 ntBASIC20.68■□□□□ 0.9
CXCL3P19876 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CXCL3P19876 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CXCL3P19876 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CXCL3P19876 AP004609.3-201ENST00000610705 1884 ntBASIC20.68■□□□□ 0.9
CXCL3P19876 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CXCL3P19876 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CXCL3P19876 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.67■□□□□ 0.9
CXCL3P19876 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CXCL3P19876 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CXCL3P19876 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CXCL3P19876 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CXCL3P19876 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.66■□□□□ 0.9
CXCL3P19876 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CXCL3P19876 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CXCL3P19876 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CXCL3P19876 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CXCL3P19876 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CXCL3P19876 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CXCL3P19876 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CXCL3P19876 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CXCL3P19876 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.64■□□□□ 0.89
CXCL3P19876 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CXCL3P19876 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.64■□□□□ 0.89
CXCL3P19876 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.63■□□□□ 0.89
CXCL3P19876 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CXCL3P19876 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CXCL3P19876 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CXCL3P19876 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CXCL3P19876 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.63■□□□□ 0.89
CXCL3P19876 AC022211.4-201ENST00000625094 2161 ntBASIC20.62■□□□□ 0.89
CXCL3P19876 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.62■□□□□ 0.89
CXCL3P19876 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CXCL3P19876 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms