Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
PPP3CBP16298 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PPP3CBP16298 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PPP3CBP16298 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
PPP3CBP16298 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PPP3CBP16298 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.99■■□□□ 1.11
PPP3CBP16298 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PPP3CBP16298 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PPP3CBP16298 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
PPP3CBP16298 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PPP3CBP16298 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.98■■□□□ 1.11
PPP3CBP16298 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
PPP3CBP16298 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.98■■□□□ 1.11
PPP3CBP16298 ECEL1P2-201ENST00000461596 1295 ntBASIC21.97■■□□□ 1.11
PPP3CBP16298 AC092296.2-201ENST00000589470 999 ntBASIC21.97■■□□□ 1.11
PPP3CBP16298 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PPP3CBP16298 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
PPP3CBP16298 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
PPP3CBP16298 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PPP3CBP16298 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
PPP3CBP16298 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PPP3CBP16298 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.95■■□□□ 1.1
PPP3CBP16298 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PPP3CBP16298 NTF6A-201ENST00000591175 560 ntBASIC21.95■■□□□ 1.1
PPP3CBP16298 AL139393.2-201ENST00000608721 2025 ntBASIC21.95■■□□□ 1.1
PPP3CBP16298 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
PPP3CBP16298 DRD5P2-201ENST00000421395 2012 ntBASIC21.94■■□□□ 1.1
PPP3CBP16298 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PPP3CBP16298 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.94■■□□□ 1.1
PPP3CBP16298 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PPP3CBP16298 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PPP3CBP16298 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PPP3CBP16298 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.92■■□□□ 1.1
PPP3CBP16298 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PPP3CBP16298 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PPP3CBP16298 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.92■■□□□ 1.1
PPP3CBP16298 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PPP3CBP16298 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
PPP3CBP16298 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
PPP3CBP16298 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.91■■□□□ 1.1
PPP3CBP16298 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PPP3CBP16298 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PPP3CBP16298 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.91■■□□□ 1.1
PPP3CBP16298 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PPP3CBP16298 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PPP3CBP16298 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
PPP3CBP16298 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.89■■□□□ 1.09
PPP3CBP16298 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.89■■□□□ 1.09
PPP3CBP16298 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.89■■□□□ 1.09
PPP3CBP16298 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PPP3CBP16298 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.89■■□□□ 1.09
PPP3CBP16298 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
PPP3CBP16298 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
PPP3CBP16298 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
PPP3CBP16298 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PPP3CBP16298 AP002414.2-202ENST00000590929 1450 ntBASIC21.88■■□□□ 1.09
PPP3CBP16298 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
PPP3CBP16298 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PPP3CBP16298 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.87■■□□□ 1.09
PPP3CBP16298 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.87■■□□□ 1.09
PPP3CBP16298 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PPP3CBP16298 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PPP3CBP16298 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PPP3CBP16298 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.87■■□□□ 1.09
PPP3CBP16298 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PPP3CBP16298 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PPP3CBP16298 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PPP3CBP16298 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PPP3CBP16298 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.86■■□□□ 1.09
PPP3CBP16298 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PPP3CBP16298 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PPP3CBP16298 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PPP3CBP16298 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PPP3CBP16298 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
PPP3CBP16298 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.85■■□□□ 1.09
PPP3CBP16298 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.85■■□□□ 1.09
PPP3CBP16298 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
PPP3CBP16298 AC012354.3-201ENST00000623734 483 ntBASIC21.85■■□□□ 1.09
PPP3CBP16298 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
PPP3CBP16298 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PPP3CBP16298 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PPP3CBP16298 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PPP3CBP16298 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
PPP3CBP16298 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PPP3CBP16298 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PPP3CBP16298 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PPP3CBP16298 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
PPP3CBP16298 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
PPP3CBP16298 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.83■■□□□ 1.09
PPP3CBP16298 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.83■■□□□ 1.09
PPP3CBP16298 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.83■■□□□ 1.09
PPP3CBP16298 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.83■■□□□ 1.09
PPP3CBP16298 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.83■■□□□ 1.08
PPP3CBP16298 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
PPP3CBP16298 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.83■■□□□ 1.08
PPP3CBP16298 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.83■■□□□ 1.08
PPP3CBP16298 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PPP3CBP16298 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PPP3CBP16298 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PPP3CBP16298 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms