Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
MMP1P03956 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.56■■■□□ 2.16
MMP1P03956 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
MMP1P03956 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
MMP1P03956 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
MMP1P03956 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
MMP1P03956 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC28.55■■■□□ 2.16
MMP1P03956 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.55■■■□□ 2.16
MMP1P03956 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
MMP1P03956 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
MMP1P03956 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
MMP1P03956 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
MMP1P03956 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
MMP1P03956 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC28.53■■■□□ 2.16
MMP1P03956 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
MMP1P03956 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC28.53■■■□□ 2.16
MMP1P03956 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
MMP1P03956 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC28.52■■■□□ 2.16
MMP1P03956 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
MMP1P03956 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
MMP1P03956 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.16
MMP1P03956 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
MMP1P03956 AP004609.3-201ENST00000610705 1884 ntBASIC28.51■■■□□ 2.15
MMP1P03956 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
MMP1P03956 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
MMP1P03956 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
MMP1P03956 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
MMP1P03956 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
MMP1P03956 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
MMP1P03956 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
MMP1P03956 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
MMP1P03956 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
MMP1P03956 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
MMP1P03956 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC28.49■■■□□ 2.15
MMP1P03956 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.49■■■□□ 2.15
MMP1P03956 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
MMP1P03956 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
MMP1P03956 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC28.48■■■□□ 2.15
MMP1P03956 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
MMP1P03956 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
MMP1P03956 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
MMP1P03956 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.48■■■□□ 2.15
MMP1P03956 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
MMP1P03956 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
MMP1P03956 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC28.47■■■□□ 2.15
MMP1P03956 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
MMP1P03956 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC28.47■■■□□ 2.15
MMP1P03956 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
MMP1P03956 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.46■■■□□ 2.15
MMP1P03956 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.46■■■□□ 2.15
MMP1P03956 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.46■■■□□ 2.15
MMP1P03956 AC142472.1-201ENST00000612013 1741 ntBASIC28.46■■■□□ 2.15
MMP1P03956 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.45■■■□□ 2.15
MMP1P03956 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
MMP1P03956 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
MMP1P03956 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
MMP1P03956 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
MMP1P03956 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
MMP1P03956 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
MMP1P03956 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
MMP1P03956 MED25-210ENST00000612854 801 ntTSL 5 BASIC28.44■■■□□ 2.14
MMP1P03956 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
MMP1P03956 MED25-214ENST00000622402 642 ntTSL 5 BASIC28.44■■■□□ 2.14
MMP1P03956 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
MMP1P03956 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
MMP1P03956 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
MMP1P03956 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
MMP1P03956 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC28.43■■■□□ 2.14
MMP1P03956 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
MMP1P03956 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
MMP1P03956 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.42■■■□□ 2.14
MMP1P03956 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC28.42■■■□□ 2.14
MMP1P03956 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
MMP1P03956 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC28.41■■■□□ 2.14
MMP1P03956 AL359258.2-201ENST00000564063 1566 ntBASIC28.41■■■□□ 2.14
MMP1P03956 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
MMP1P03956 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC28.4■■■□□ 2.14
MMP1P03956 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
MMP1P03956 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
MMP1P03956 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC28.39■■■□□ 2.14
MMP1P03956 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC28.39■■■□□ 2.14
MMP1P03956 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC28.39■■■□□ 2.13
MMP1P03956 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC28.38■■■□□ 2.13
MMP1P03956 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC28.37■■■□□ 2.13
MMP1P03956 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
MMP1P03956 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.37■■■□□ 2.13
MMP1P03956 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
MMP1P03956 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
MMP1P03956 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
MMP1P03956 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.37■■■□□ 2.13
MMP1P03956 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC28.37■■■□□ 2.13
MMP1P03956 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
MMP1P03956 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC28.36■■■□□ 2.13
MMP1P03956 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
MMP1P03956 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC28.36■■■□□ 2.13
MMP1P03956 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.35■■■□□ 2.13
MMP1P03956 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC28.35■■■□□ 2.13
MMP1P03956 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
MMP1P03956 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
MMP1P03956 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC28.34■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms