Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ABCA1O95477 AC131212.1-201ENST00000613771 668 ntBASIC20.74■□□□□ 0.91
ABCA1O95477 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCA1O95477 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
ABCA1O95477 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.73■□□□□ 0.91
ABCA1O95477 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.73■□□□□ 0.91
ABCA1O95477 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ABCA1O95477 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.72■□□□□ 0.91
ABCA1O95477 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.72■□□□□ 0.91
ABCA1O95477 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.72■□□□□ 0.91
ABCA1O95477 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.72■□□□□ 0.91
ABCA1O95477 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCA1O95477 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ABCA1O95477 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.71■□□□□ 0.91
ABCA1O95477 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ABCA1O95477 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.71■□□□□ 0.91
ABCA1O95477 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.71■□□□□ 0.91
ABCA1O95477 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ABCA1O95477 AL359258.2-201ENST00000564063 1566 ntBASIC20.7■□□□□ 0.9
ABCA1O95477 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ABCA1O95477 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ABCA1O95477 SMPD5-203ENST00000639008 1464 ntBASIC20.7■□□□□ 0.9
ABCA1O95477 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.7■□□□□ 0.9
ABCA1O95477 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ABCA1O95477 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ABCA1O95477 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ABCA1O95477 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
ABCA1O95477 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.69■□□□□ 0.9
ABCA1O95477 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.69■□□□□ 0.9
ABCA1O95477 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ABCA1O95477 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ABCA1O95477 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ABCA1O95477 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ABCA1O95477 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ABCA1O95477 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ABCA1O95477 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ABCA1O95477 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
ABCA1O95477 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ABCA1O95477 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.67■□□□□ 0.9
ABCA1O95477 AC010980.1-201ENST00000587192 1142 ntBASIC20.67■□□□□ 0.9
ABCA1O95477 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ABCA1O95477 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ABCA1O95477 GUSBP5-201ENST00000418136 578 ntBASIC20.66■□□□□ 0.9
ABCA1O95477 AC026202.3-201ENST00000600805 1127 ntBASIC20.66■□□□□ 0.9
ABCA1O95477 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
ABCA1O95477 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ABCA1O95477 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.66■□□□□ 0.9
ABCA1O95477 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ABCA1O95477 RP9P-202ENST00000450133 1212 ntBASIC20.66■□□□□ 0.9
ABCA1O95477 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ABCA1O95477 SPCS2P3-201ENST00000500401 656 ntBASIC20.65■□□□□ 0.9
ABCA1O95477 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
ABCA1O95477 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ABCA1O95477 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ABCA1O95477 KRT8P33-201ENST00000508125 1423 ntBASIC20.64■□□□□ 0.9
ABCA1O95477 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
ABCA1O95477 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
ABCA1O95477 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ABCA1O95477 AC074183.2-201ENST00000623112 922 ntBASIC20.64■□□□□ 0.89
ABCA1O95477 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ABCA1O95477 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ABCA1O95477 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.63■□□□□ 0.89
ABCA1O95477 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.63■□□□□ 0.89
ABCA1O95477 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.63■□□□□ 0.89
ABCA1O95477 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ABCA1O95477 AC139795.1-202ENST00000500444 432 ntBASIC20.62■□□□□ 0.89
ABCA1O95477 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ABCA1O95477 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ABCA1O95477 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
ABCA1O95477 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ABCA1O95477 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ABCA1O95477 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ABCA1O95477 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ABCA1O95477 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ABCA1O95477 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ABCA1O95477 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ABCA1O95477 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ABCA1O95477 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ABCA1O95477 AC100797.4-201ENST00000631653 1827 ntBASIC20.61■□□□□ 0.89
ABCA1O95477 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ABCA1O95477 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.61■□□□□ 0.89
ABCA1O95477 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ABCA1O95477 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ABCA1O95477 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ABCA1O95477 PVT1_1.1-201ENST00000615125 194 ntBASIC20.6■□□□□ 0.89
ABCA1O95477 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
ABCA1O95477 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.6■□□□□ 0.89
ABCA1O95477 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ABCA1O95477 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ABCA1O95477 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ABCA1O95477 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ABCA1O95477 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.6■□□□□ 0.89
ABCA1O95477 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.6■□□□□ 0.89
ABCA1O95477 BHLHE23-202ENST00000612929 1109 ntBASIC20.6■□□□□ 0.89
ABCA1O95477 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.59■□□□□ 0.89
ABCA1O95477 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.59■□□□□ 0.89
ABCA1O95477 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.59■□□□□ 0.89
ABCA1O95477 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ABCA1O95477 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
ABCA1O95477 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms