Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RTN3O95197 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
RTN3O95197 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RTN3O95197 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RTN3O95197 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.05■■□□□ 1.76
RTN3O95197 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RTN3O95197 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RTN3O95197 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.05■■□□□ 1.76
RTN3O95197 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
RTN3O95197 SMPD5-203ENST00000639008 1464 ntBASIC26.04■■□□□ 1.76
RTN3O95197 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
RTN3O95197 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.04■■□□□ 1.76
RTN3O95197 NTF6A-201ENST00000591175 560 ntBASIC26.04■■□□□ 1.76
RTN3O95197 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
RTN3O95197 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.04■■□□□ 1.76
RTN3O95197 LINC01003-201ENST00000564834 1764 ntBASIC26.04■■□□□ 1.76
RTN3O95197 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
RTN3O95197 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
RTN3O95197 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.03■■□□□ 1.76
RTN3O95197 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RTN3O95197 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.03■■□□□ 1.76
RTN3O95197 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.02■■□□□ 1.76
RTN3O95197 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
RTN3O95197 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.02■■□□□ 1.76
RTN3O95197 AC007029.1-201ENST00000604183 313 ntBASIC26.02■■□□□ 1.76
RTN3O95197 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RTN3O95197 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
RTN3O95197 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.01■■□□□ 1.75
RTN3O95197 AC025884.2-201ENST00000553429 711 ntBASIC26.01■■□□□ 1.75
RTN3O95197 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.01■■□□□ 1.75
RTN3O95197 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26■■□□□ 1.75
RTN3O95197 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RTN3O95197 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26■■□□□ 1.75
RTN3O95197 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RTN3O95197 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
RTN3O95197 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RTN3O95197 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RTN3O95197 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
RTN3O95197 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RTN3O95197 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.98■■□□□ 1.75
RTN3O95197 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RTN3O95197 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
RTN3O95197 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RTN3O95197 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.97■■□□□ 1.75
RTN3O95197 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.97■■□□□ 1.75
RTN3O95197 U85056.1-201ENST00000616429 682 ntBASIC25.97■■□□□ 1.75
RTN3O95197 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
RTN3O95197 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
RTN3O95197 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
RTN3O95197 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
RTN3O95197 AC142086.6-201ENST00000621154 1765 ntBASIC25.96■■□□□ 1.75
RTN3O95197 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.96■■□□□ 1.75
RTN3O95197 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RTN3O95197 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
RTN3O95197 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
RTN3O95197 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.95■■□□□ 1.74
RTN3O95197 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RTN3O95197 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RTN3O95197 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.95■■□□□ 1.74
RTN3O95197 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RTN3O95197 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RTN3O95197 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.94■■□□□ 1.74
RTN3O95197 BX255925.1-201ENST00000566954 1854 ntBASIC25.94■■□□□ 1.74
RTN3O95197 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RTN3O95197 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.94■■□□□ 1.74
RTN3O95197 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
RTN3O95197 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
RTN3O95197 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
RTN3O95197 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RTN3O95197 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
RTN3O95197 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.92■■□□□ 1.74
RTN3O95197 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
RTN3O95197 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.91■■□□□ 1.74
RTN3O95197 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
RTN3O95197 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
RTN3O95197 RP9P-202ENST00000450133 1212 ntBASIC25.91■■□□□ 1.74
RTN3O95197 MIR3960-201ENST00000583311 91 ntBASIC25.91■■□□□ 1.74
RTN3O95197 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
RTN3O95197 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
RTN3O95197 AL359504.2-201ENST00000605506 1601 ntBASIC25.91■■□□□ 1.74
RTN3O95197 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RTN3O95197 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.9■■□□□ 1.74
RTN3O95197 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RTN3O95197 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RTN3O95197 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.9■■□□□ 1.74
RTN3O95197 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
RTN3O95197 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
RTN3O95197 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
RTN3O95197 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
RTN3O95197 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RTN3O95197 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RTN3O95197 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RTN3O95197 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
RTN3O95197 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.89■■□□□ 1.74
RTN3O95197 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.88■■□□□ 1.73
RTN3O95197 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.88■■□□□ 1.73
RTN3O95197 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
RTN3O95197 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.87■■□□□ 1.73
RTN3O95197 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RTN3O95197 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms