Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SSNA1O43805 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SSNA1O43805 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSNA1O43805 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SSNA1O43805 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SSNA1O43805 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSNA1O43805 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSNA1O43805 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SSNA1O43805 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSNA1O43805 AP002414.2-202ENST00000590929 1450 ntBASIC20.99■□□□□ 0.95
SSNA1O43805 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SSNA1O43805 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SSNA1O43805 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.98■□□□□ 0.95
SSNA1O43805 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSNA1O43805 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SSNA1O43805 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSNA1O43805 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSNA1O43805 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SSNA1O43805 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SSNA1O43805 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSNA1O43805 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC20.97■□□□□ 0.95
SSNA1O43805 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SSNA1O43805 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SSNA1O43805 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSNA1O43805 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SSNA1O43805 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSNA1O43805 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSNA1O43805 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSNA1O43805 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.96■□□□□ 0.95
SSNA1O43805 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSNA1O43805 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.95■□□□□ 0.94
SSNA1O43805 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.95■□□□□ 0.94
SSNA1O43805 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.95■□□□□ 0.94
SSNA1O43805 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSNA1O43805 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSNA1O43805 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSNA1O43805 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSNA1O43805 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SSNA1O43805 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSNA1O43805 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SSNA1O43805 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.93■□□□□ 0.94
SSNA1O43805 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SSNA1O43805 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.93■□□□□ 0.94
SSNA1O43805 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSNA1O43805 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SSNA1O43805 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.92■□□□□ 0.94
SSNA1O43805 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSNA1O43805 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SSNA1O43805 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSNA1O43805 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SSNA1O43805 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSNA1O43805 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SSNA1O43805 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSNA1O43805 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSNA1O43805 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSNA1O43805 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSNA1O43805 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSNA1O43805 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSNA1O43805 AC012676.1-201ENST00000574705 1949 ntBASIC20.9■□□□□ 0.94
SSNA1O43805 AC127502.1-201ENST00000399971 1502 ntBASIC20.9■□□□□ 0.94
SSNA1O43805 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSNA1O43805 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SSNA1O43805 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
SSNA1O43805 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
SSNA1O43805 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSNA1O43805 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SSNA1O43805 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.89■□□□□ 0.93
SSNA1O43805 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.89■□□□□ 0.93
SSNA1O43805 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSNA1O43805 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
SSNA1O43805 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
SSNA1O43805 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.88■□□□□ 0.93
SSNA1O43805 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSNA1O43805 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SSNA1O43805 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.88■□□□□ 0.93
SSNA1O43805 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SSNA1O43805 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSNA1O43805 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSNA1O43805 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SSNA1O43805 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSNA1O43805 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SSNA1O43805 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSNA1O43805 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSNA1O43805 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.86■□□□□ 0.93
SSNA1O43805 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SSNA1O43805 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSNA1O43805 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSNA1O43805 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSNA1O43805 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SSNA1O43805 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSNA1O43805 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSNA1O43805 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SSNA1O43805 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSNA1O43805 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSNA1O43805 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSNA1O43805 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSNA1O43805 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SSNA1O43805 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
SSNA1O43805 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.85■□□□□ 0.93
SSNA1O43805 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms