Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SDHDO14521 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
SDHDO14521 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SDHDO14521 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.9■■□□□ 1.42
SDHDO14521 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
SDHDO14521 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.9■■□□□ 1.42
SDHDO14521 WHAMMP3-201ENST00000611636 1609 ntBASIC23.89■■□□□ 1.42
SDHDO14521 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.89■■□□□ 1.41
SDHDO14521 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SDHDO14521 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SDHDO14521 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SDHDO14521 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.88■■□□□ 1.41
SDHDO14521 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SDHDO14521 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SDHDO14521 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SDHDO14521 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SDHDO14521 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SDHDO14521 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.88■■□□□ 1.41
SDHDO14521 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
SDHDO14521 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SDHDO14521 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SDHDO14521 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
SDHDO14521 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SDHDO14521 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
SDHDO14521 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.87■■□□□ 1.41
SDHDO14521 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
SDHDO14521 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
SDHDO14521 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SDHDO14521 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SDHDO14521 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SDHDO14521 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SDHDO14521 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.86■■□□□ 1.41
SDHDO14521 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SDHDO14521 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.85■■□□□ 1.41
SDHDO14521 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SDHDO14521 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.84■■□□□ 1.41
SDHDO14521 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
SDHDO14521 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SDHDO14521 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.83■■□□□ 1.41
SDHDO14521 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
SDHDO14521 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SDHDO14521 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SDHDO14521 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.83■■□□□ 1.41
SDHDO14521 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SDHDO14521 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.4
SDHDO14521 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
SDHDO14521 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SDHDO14521 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SDHDO14521 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SDHDO14521 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SDHDO14521 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
SDHDO14521 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.82■■□□□ 1.4
SDHDO14521 AC087741.3-201ENST00000624270 1347 ntBASIC23.82■■□□□ 1.4
SDHDO14521 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SDHDO14521 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.81■■□□□ 1.4
SDHDO14521 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.81■■□□□ 1.4
SDHDO14521 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
SDHDO14521 AP006261.1-201ENST00000584783 668 ntBASIC23.81■■□□□ 1.4
SDHDO14521 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SDHDO14521 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SDHDO14521 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SDHDO14521 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.8■■□□□ 1.4
SDHDO14521 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SDHDO14521 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SDHDO14521 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.79■■□□□ 1.4
SDHDO14521 AC093323.1-202ENST00000635031 2045 ntBASIC23.79■■□□□ 1.4
SDHDO14521 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SDHDO14521 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SDHDO14521 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SDHDO14521 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SDHDO14521 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SDHDO14521 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.78■■□□□ 1.4
SDHDO14521 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SDHDO14521 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SDHDO14521 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SDHDO14521 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SDHDO14521 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.77■■□□□ 1.4
SDHDO14521 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SDHDO14521 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
SDHDO14521 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SDHDO14521 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.77■■□□□ 1.4
SDHDO14521 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SDHDO14521 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SDHDO14521 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.76■■□□□ 1.39
SDHDO14521 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
SDHDO14521 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SDHDO14521 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.75■■□□□ 1.39
SDHDO14521 ERN1-208ENST00000606895 2068 ntBASIC23.75■■□□□ 1.39
SDHDO14521 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SDHDO14521 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SDHDO14521 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SDHDO14521 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SDHDO14521 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SDHDO14521 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SDHDO14521 AC010501.1-201ENST00000606270 1962 ntBASIC23.73■■□□□ 1.39
SDHDO14521 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
SDHDO14521 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SDHDO14521 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SDHDO14521 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SDHDO14521 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms