Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DUXBA0A1W2PPF3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
DUXBA0A1W2PPF3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DUXBA0A1W2PPF3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DUXBA0A1W2PPF3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
DUXBA0A1W2PPF3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.13■□□□□ 0.81
DUXBA0A1W2PPF3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
DUXBA0A1W2PPF3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
DUXBA0A1W2PPF3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DUXBA0A1W2PPF3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.12■□□□□ 0.81
DUXBA0A1W2PPF3 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DUXBA0A1W2PPF3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DUXBA0A1W2PPF3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DUXBA0A1W2PPF3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DUXBA0A1W2PPF3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
DUXBA0A1W2PPF3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DUXBA0A1W2PPF3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DUXBA0A1W2PPF3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
DUXBA0A1W2PPF3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DUXBA0A1W2PPF3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.11■□□□□ 0.81
DUXBA0A1W2PPF3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DUXBA0A1W2PPF3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DUXBA0A1W2PPF3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.1■□□□□ 0.81
DUXBA0A1W2PPF3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
DUXBA0A1W2PPF3 AC136428.2-201ENST00000563187 214 ntBASIC20.1■□□□□ 0.81
DUXBA0A1W2PPF3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DUXBA0A1W2PPF3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DUXBA0A1W2PPF3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DUXBA0A1W2PPF3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DUXBA0A1W2PPF3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
DUXBA0A1W2PPF3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.09■□□□□ 0.81
DUXBA0A1W2PPF3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DUXBA0A1W2PPF3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.09■□□□□ 0.81
DUXBA0A1W2PPF3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
DUXBA0A1W2PPF3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
DUXBA0A1W2PPF3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.08■□□□□ 0.81
DUXBA0A1W2PPF3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.08■□□□□ 0.81
DUXBA0A1W2PPF3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
DUXBA0A1W2PPF3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
DUXBA0A1W2PPF3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
DUXBA0A1W2PPF3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DUXBA0A1W2PPF3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DUXBA0A1W2PPF3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DUXBA0A1W2PPF3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
DUXBA0A1W2PPF3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DUXBA0A1W2PPF3 ERN1-208ENST00000606895 2068 ntBASIC20.07■□□□□ 0.8
DUXBA0A1W2PPF3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DUXBA0A1W2PPF3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.07■□□□□ 0.8
DUXBA0A1W2PPF3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DUXBA0A1W2PPF3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DUXBA0A1W2PPF3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.06■□□□□ 0.8
DUXBA0A1W2PPF3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
DUXBA0A1W2PPF3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.06■□□□□ 0.8
DUXBA0A1W2PPF3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.06■□□□□ 0.8
DUXBA0A1W2PPF3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DUXBA0A1W2PPF3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DUXBA0A1W2PPF3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DUXBA0A1W2PPF3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.06■□□□□ 0.8
DUXBA0A1W2PPF3 WHAMMP3-201ENST00000611636 1609 ntBASIC20.05■□□□□ 0.8
DUXBA0A1W2PPF3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.05■□□□□ 0.8
DUXBA0A1W2PPF3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
DUXBA0A1W2PPF3 AC010501.1-201ENST00000606270 1962 ntBASIC20.05■□□□□ 0.8
DUXBA0A1W2PPF3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.05■□□□□ 0.8
DUXBA0A1W2PPF3 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
DUXBA0A1W2PPF3 AC097358.2-201ENST00000607541 1159 ntBASIC20.05■□□□□ 0.8
DUXBA0A1W2PPF3 AC142381.3-201ENST00000568208 1670 ntBASIC20.05■□□□□ 0.8
DUXBA0A1W2PPF3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DUXBA0A1W2PPF3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DUXBA0A1W2PPF3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
DUXBA0A1W2PPF3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DUXBA0A1W2PPF3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
DUXBA0A1W2PPF3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DUXBA0A1W2PPF3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
DUXBA0A1W2PPF3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DUXBA0A1W2PPF3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.04■□□□□ 0.8
DUXBA0A1W2PPF3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.04■□□□□ 0.8
DUXBA0A1W2PPF3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
DUXBA0A1W2PPF3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DUXBA0A1W2PPF3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.03■□□□□ 0.8
DUXBA0A1W2PPF3 AC005559.1-201ENST00000589661 871 ntBASIC20.03■□□□□ 0.8
DUXBA0A1W2PPF3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DUXBA0A1W2PPF3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
DUXBA0A1W2PPF3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.02■□□□□ 0.8
DUXBA0A1W2PPF3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
DUXBA0A1W2PPF3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DUXBA0A1W2PPF3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
DUXBA0A1W2PPF3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DUXBA0A1W2PPF3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
DUXBA0A1W2PPF3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DUXBA0A1W2PPF3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DUXBA0A1W2PPF3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DUXBA0A1W2PPF3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20■□□□□ 0.79
DUXBA0A1W2PPF3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20■□□□□ 0.79
DUXBA0A1W2PPF3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
DUXBA0A1W2PPF3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20■□□□□ 0.79
DUXBA0A1W2PPF3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DUXBA0A1W2PPF3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DUXBA0A1W2PPF3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DUXBA0A1W2PPF3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.99■□□□□ 0.79
DUXBA0A1W2PPF3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms