Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.27■□□□□ 0.52
TRAV21A0A0B4J279 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV21A0A0B4J279 DUSP8P4-201ENST00000399538 1761 ntBASIC18.27■□□□□ 0.51
TRAV21A0A0B4J279 AC142472.1-201ENST00000612013 1741 ntBASIC18.26■□□□□ 0.51
TRAV21A0A0B4J279 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV21A0A0B4J279 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TRAV21A0A0B4J279 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV21A0A0B4J279 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV21A0A0B4J279 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV21A0A0B4J279 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV21A0A0B4J279 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV21A0A0B4J279 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV21A0A0B4J279 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV21A0A0B4J279 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV21A0A0B4J279 WHAMMP3-201ENST00000611636 1609 ntBASIC18.24■□□□□ 0.51
TRAV21A0A0B4J279 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.24■□□□□ 0.51
TRAV21A0A0B4J279 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
TRAV21A0A0B4J279 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV21A0A0B4J279 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV21A0A0B4J279 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV21A0A0B4J279 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV21A0A0B4J279 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV21A0A0B4J279 AC135731.1-201ENST00000569415 2548 ntBASIC18.23■□□□□ 0.51
TRAV21A0A0B4J279 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV21A0A0B4J279 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV21A0A0B4J279 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV21A0A0B4J279 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRAV21A0A0B4J279 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV21A0A0B4J279 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC18.22■□□□□ 0.51
TRAV21A0A0B4J279 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV21A0A0B4J279 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV21A0A0B4J279 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV21A0A0B4J279 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV21A0A0B4J279 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRAV21A0A0B4J279 AL162393.1-201ENST00000437852 946 ntBASIC18.21■□□□□ 0.51
TRAV21A0A0B4J279 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV21A0A0B4J279 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV21A0A0B4J279 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV21A0A0B4J279 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV21A0A0B4J279 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV21A0A0B4J279 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TRAV21A0A0B4J279 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV21A0A0B4J279 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV21A0A0B4J279 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV21A0A0B4J279 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV21A0A0B4J279 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV21A0A0B4J279 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV21A0A0B4J279 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV21A0A0B4J279 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV21A0A0B4J279 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV21A0A0B4J279 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TRAV21A0A0B4J279 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV21A0A0B4J279 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV21A0A0B4J279 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRAV21A0A0B4J279 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.19■□□□□ 0.5
TRAV21A0A0B4J279 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV21A0A0B4J279 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV21A0A0B4J279 AC020928.2-201ENST00000588717 2197 ntBASIC18.18■□□□□ 0.5
TRAV21A0A0B4J279 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV21A0A0B4J279 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV21A0A0B4J279 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAV21A0A0B4J279 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV21A0A0B4J279 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAV21A0A0B4J279 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV21A0A0B4J279 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV21A0A0B4J279 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.17■□□□□ 0.5
TRAV21A0A0B4J279 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV21A0A0B4J279 DUX4L29-201ENST00000425409 679 ntBASIC18.17■□□□□ 0.5
TRAV21A0A0B4J279 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV21A0A0B4J279 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV21A0A0B4J279 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV21A0A0B4J279 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV21A0A0B4J279 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TRAV21A0A0B4J279 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.16■□□□□ 0.5
TRAV21A0A0B4J279 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TRAV21A0A0B4J279 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV21A0A0B4J279 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV21A0A0B4J279 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV21A0A0B4J279 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV21A0A0B4J279 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV21A0A0B4J279 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.15■□□□□ 0.5
TRAV21A0A0B4J279 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV21A0A0B4J279 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV21A0A0B4J279 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV21A0A0B4J279 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV21A0A0B4J279 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV21A0A0B4J279 AC021231.2-201ENST00000594613 730 ntBASIC18.15■□□□□ 0.5
TRAV21A0A0B4J279 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TRAV21A0A0B4J279 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV21A0A0B4J279 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRAV21A0A0B4J279 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV21A0A0B4J279 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV21A0A0B4J279 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV21A0A0B4J279 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TRAV21A0A0B4J279 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAV21A0A0B4J279 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV21A0A0B4J279 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV21A0A0B4J279 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV21A0A0B4J279 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV21A0A0B4J279 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms