Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV20A0A0B4J274 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV20A0A0B4J274 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.79■□□□□ 0.92
TRAV20A0A0B4J274 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV20A0A0B4J274 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAV20A0A0B4J274 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
TRAV20A0A0B4J274 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.78■□□□□ 0.92
TRAV20A0A0B4J274 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
TRAV20A0A0B4J274 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.78■□□□□ 0.92
TRAV20A0A0B4J274 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TRAV20A0A0B4J274 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
TRAV20A0A0B4J274 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.77■□□□□ 0.92
TRAV20A0A0B4J274 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV20A0A0B4J274 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRAV20A0A0B4J274 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.76■□□□□ 0.91
TRAV20A0A0B4J274 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TRAV20A0A0B4J274 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TRAV20A0A0B4J274 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV20A0A0B4J274 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV20A0A0B4J274 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV20A0A0B4J274 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TRAV20A0A0B4J274 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV20A0A0B4J274 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV20A0A0B4J274 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.74■□□□□ 0.91
TRAV20A0A0B4J274 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV20A0A0B4J274 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV20A0A0B4J274 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV20A0A0B4J274 U85056.1-201ENST00000616429 682 ntBASIC20.73■□□□□ 0.91
TRAV20A0A0B4J274 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV20A0A0B4J274 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV20A0A0B4J274 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.72■□□□□ 0.91
TRAV20A0A0B4J274 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV20A0A0B4J274 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV20A0A0B4J274 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV20A0A0B4J274 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.72■□□□□ 0.91
TRAV20A0A0B4J274 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.72■□□□□ 0.91
TRAV20A0A0B4J274 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV20A0A0B4J274 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV20A0A0B4J274 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.72■□□□□ 0.91
TRAV20A0A0B4J274 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV20A0A0B4J274 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV20A0A0B4J274 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.72■□□□□ 0.91
TRAV20A0A0B4J274 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.72■□□□□ 0.91
TRAV20A0A0B4J274 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.71■□□□□ 0.91
TRAV20A0A0B4J274 AC100797.4-201ENST00000631653 1827 ntBASIC20.71■□□□□ 0.91
TRAV20A0A0B4J274 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV20A0A0B4J274 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV20A0A0B4J274 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV20A0A0B4J274 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.71■□□□□ 0.91
TRAV20A0A0B4J274 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.71■□□□□ 0.91
TRAV20A0A0B4J274 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV20A0A0B4J274 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV20A0A0B4J274 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV20A0A0B4J274 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TRAV20A0A0B4J274 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV20A0A0B4J274 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV20A0A0B4J274 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TRAV20A0A0B4J274 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.69■□□□□ 0.9
TRAV20A0A0B4J274 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV20A0A0B4J274 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV20A0A0B4J274 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV20A0A0B4J274 AC018358.1-201ENST00000631079 1402 ntBASIC20.68■□□□□ 0.9
TRAV20A0A0B4J274 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.68■□□□□ 0.9
TRAV20A0A0B4J274 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV20A0A0B4J274 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV20A0A0B4J274 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
TRAV20A0A0B4J274 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV20A0A0B4J274 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAV20A0A0B4J274 AL157400.5-201ENST00000507624 621 ntBASIC20.67■□□□□ 0.9
TRAV20A0A0B4J274 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAV20A0A0B4J274 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.67■□□□□ 0.9
TRAV20A0A0B4J274 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV20A0A0B4J274 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAV20A0A0B4J274 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV20A0A0B4J274 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAV20A0A0B4J274 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAV20A0A0B4J274 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV20A0A0B4J274 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV20A0A0B4J274 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV20A0A0B4J274 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV20A0A0B4J274 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.66■□□□□ 0.9
TRAV20A0A0B4J274 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
TRAV20A0A0B4J274 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV20A0A0B4J274 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV20A0A0B4J274 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TRAV20A0A0B4J274 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV20A0A0B4J274 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TRAV20A0A0B4J274 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV20A0A0B4J274 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV20A0A0B4J274 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.64■□□□□ 0.89
TRAV20A0A0B4J274 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.64■□□□□ 0.89
TRAV20A0A0B4J274 AL033527.3-201ENST00000566366 1196 ntBASIC20.64■□□□□ 0.89
TRAV20A0A0B4J274 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.64■□□□□ 0.89
TRAV20A0A0B4J274 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV20A0A0B4J274 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV20A0A0B4J274 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV20A0A0B4J274 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TRAV20A0A0B4J274 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.63■□□□□ 0.89
TRAV20A0A0B4J274 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV20A0A0B4J274 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms