Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TRBV23-1A0A0A0MS06 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV23-1A0A0A0MS06 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV23-1A0A0A0MS06 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.69■□□□□ 0.9
TRBV23-1A0A0A0MS06 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV23-1A0A0A0MS06 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV23-1A0A0A0MS06 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV23-1A0A0A0MS06 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV23-1A0A0A0MS06 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV23-1A0A0A0MS06 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
TRBV23-1A0A0A0MS06 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.68■□□□□ 0.9
TRBV23-1A0A0A0MS06 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV23-1A0A0A0MS06 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV23-1A0A0A0MS06 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.68■□□□□ 0.9
TRBV23-1A0A0A0MS06 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV23-1A0A0A0MS06 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV23-1A0A0A0MS06 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV23-1A0A0A0MS06 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV23-1A0A0A0MS06 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.67■□□□□ 0.9
TRBV23-1A0A0A0MS06 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRBV23-1A0A0A0MS06 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV23-1A0A0A0MS06 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV23-1A0A0A0MS06 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV23-1A0A0A0MS06 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV23-1A0A0A0MS06 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.66■□□□□ 0.9
TRBV23-1A0A0A0MS06 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV23-1A0A0A0MS06 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV23-1A0A0A0MS06 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV23-1A0A0A0MS06 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.65■□□□□ 0.9
TRBV23-1A0A0A0MS06 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.65■□□□□ 0.9
TRBV23-1A0A0A0MS06 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV23-1A0A0A0MS06 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRBV23-1A0A0A0MS06 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.65■□□□□ 0.9
TRBV23-1A0A0A0MS06 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRBV23-1A0A0A0MS06 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TRBV23-1A0A0A0MS06 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV23-1A0A0A0MS06 AC126177.7-201ENST00000547904 679 ntBASIC20.64■□□□□ 0.89
TRBV23-1A0A0A0MS06 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV23-1A0A0A0MS06 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRBV23-1A0A0A0MS06 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.64■□□□□ 0.89
TRBV23-1A0A0A0MS06 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV23-1A0A0A0MS06 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV23-1A0A0A0MS06 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.63■□□□□ 0.89
TRBV23-1A0A0A0MS06 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TRBV23-1A0A0A0MS06 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TRBV23-1A0A0A0MS06 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TRBV23-1A0A0A0MS06 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV23-1A0A0A0MS06 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.63■□□□□ 0.89
TRBV23-1A0A0A0MS06 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV23-1A0A0A0MS06 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV23-1A0A0A0MS06 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV23-1A0A0A0MS06 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.62■□□□□ 0.89
TRBV23-1A0A0A0MS06 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV23-1A0A0A0MS06 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.62■□□□□ 0.89
TRBV23-1A0A0A0MS06 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.62■□□□□ 0.89
TRBV23-1A0A0A0MS06 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV23-1A0A0A0MS06 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.61■□□□□ 0.89
TRBV23-1A0A0A0MS06 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV23-1A0A0A0MS06 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.61■□□□□ 0.89
TRBV23-1A0A0A0MS06 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV23-1A0A0A0MS06 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.61■□□□□ 0.89
TRBV23-1A0A0A0MS06 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TRBV23-1A0A0A0MS06 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRBV23-1A0A0A0MS06 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.6■□□□□ 0.89
TRBV23-1A0A0A0MS06 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.6■□□□□ 0.89
TRBV23-1A0A0A0MS06 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRBV23-1A0A0A0MS06 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRBV23-1A0A0A0MS06 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV23-1A0A0A0MS06 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
TRBV23-1A0A0A0MS06 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV23-1A0A0A0MS06 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.59■□□□□ 0.89
TRBV23-1A0A0A0MS06 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV23-1A0A0A0MS06 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.59■□□□□ 0.89
TRBV23-1A0A0A0MS06 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV23-1A0A0A0MS06 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV23-1A0A0A0MS06 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV23-1A0A0A0MS06 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRBV23-1A0A0A0MS06 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRBV23-1A0A0A0MS06 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRBV23-1A0A0A0MS06 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TRBV23-1A0A0A0MS06 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV23-1A0A0A0MS06 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV23-1A0A0A0MS06 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.57■□□□□ 0.88
TRBV23-1A0A0A0MS06 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV23-1A0A0A0MS06 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.57■□□□□ 0.88
TRBV23-1A0A0A0MS06 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV23-1A0A0A0MS06 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV23-1A0A0A0MS06 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV23-1A0A0A0MS06 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV23-1A0A0A0MS06 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.56■□□□□ 0.88
TRBV23-1A0A0A0MS06 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV23-1A0A0A0MS06 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.56■□□□□ 0.88
TRBV23-1A0A0A0MS06 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TRBV23-1A0A0A0MS06 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TRBV23-1A0A0A0MS06 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.56■□□□□ 0.88
TRBV23-1A0A0A0MS06 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.56■□□□□ 0.88
TRBV23-1A0A0A0MS06 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.56■□□□□ 0.88
TRBV23-1A0A0A0MS06 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TRBV23-1A0A0A0MS06 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TRBV23-1A0A0A0MS06 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms