Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV26-1A0A087WT03 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV26-1A0A087WT03 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV26-1A0A087WT03 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
TRAV26-1A0A087WT03 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV26-1A0A087WT03 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV26-1A0A087WT03 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV26-1A0A087WT03 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV26-1A0A087WT03 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV26-1A0A087WT03 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRAV26-1A0A087WT03 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
TRAV26-1A0A087WT03 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV26-1A0A087WT03 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAV26-1A0A087WT03 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
TRAV26-1A0A087WT03 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAV26-1A0A087WT03 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV26-1A0A087WT03 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TRAV26-1A0A087WT03 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TRAV26-1A0A087WT03 AC018358.1-201ENST00000631079 1402 ntBASIC17.63■□□□□ 0.41
TRAV26-1A0A087WT03 MIR219A2-201ENST00000608502 1504 ntBASIC17.62■□□□□ 0.41
TRAV26-1A0A087WT03 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV26-1A0A087WT03 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV26-1A0A087WT03 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV26-1A0A087WT03 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV26-1A0A087WT03 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV26-1A0A087WT03 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
TRAV26-1A0A087WT03 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV26-1A0A087WT03 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV26-1A0A087WT03 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV26-1A0A087WT03 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV26-1A0A087WT03 AC148477.6-201ENST00000623746 465 ntBASIC17.62■□□□□ 0.41
TRAV26-1A0A087WT03 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV26-1A0A087WT03 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV26-1A0A087WT03 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV26-1A0A087WT03 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TRAV26-1A0A087WT03 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV26-1A0A087WT03 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.61■□□□□ 0.41
TRAV26-1A0A087WT03 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV26-1A0A087WT03 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV26-1A0A087WT03 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV26-1A0A087WT03 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.61■□□□□ 0.41
TRAV26-1A0A087WT03 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
TRAV26-1A0A087WT03 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV26-1A0A087WT03 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAV26-1A0A087WT03 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV26-1A0A087WT03 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TRAV26-1A0A087WT03 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV26-1A0A087WT03 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV26-1A0A087WT03 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
TRAV26-1A0A087WT03 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV26-1A0A087WT03 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV26-1A0A087WT03 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TRAV26-1A0A087WT03 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV26-1A0A087WT03 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.59■□□□□ 0.41
TRAV26-1A0A087WT03 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAV26-1A0A087WT03 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV26-1A0A087WT03 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV26-1A0A087WT03 BX255925.1-201ENST00000566954 1854 ntBASIC17.58■□□□□ 0.41
TRAV26-1A0A087WT03 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV26-1A0A087WT03 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV26-1A0A087WT03 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV26-1A0A087WT03 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV26-1A0A087WT03 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV26-1A0A087WT03 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.58■□□□□ 0.4
TRAV26-1A0A087WT03 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TRAV26-1A0A087WT03 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV26-1A0A087WT03 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV26-1A0A087WT03 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV26-1A0A087WT03 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV26-1A0A087WT03 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV26-1A0A087WT03 LINC01003-201ENST00000564834 1764 ntBASIC17.57■□□□□ 0.4
TRAV26-1A0A087WT03 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAV26-1A0A087WT03 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV26-1A0A087WT03 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.56■□□□□ 0.4
TRAV26-1A0A087WT03 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV26-1A0A087WT03 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV26-1A0A087WT03 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV26-1A0A087WT03 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV26-1A0A087WT03 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAV26-1A0A087WT03 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV26-1A0A087WT03 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV26-1A0A087WT03 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV26-1A0A087WT03 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV26-1A0A087WT03 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV26-1A0A087WT03 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV26-1A0A087WT03 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV26-1A0A087WT03 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV26-1A0A087WT03 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV26-1A0A087WT03 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV26-1A0A087WT03 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV26-1A0A087WT03 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRAV26-1A0A087WT03 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV26-1A0A087WT03 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRAV26-1A0A087WT03 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV26-1A0A087WT03 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV26-1A0A087WT03 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV26-1A0A087WT03 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV26-1A0A087WT03 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV26-1A0A087WT03 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV26-1A0A087WT03 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms