Protein–RNA interactions for Protein: A0A075B6T6

TRAV12-2, T-cell receptor alpha variable 12-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-2A0A075B6T6 WHAMMP3-201ENST00000611636 1609 ntBASIC18.27■□□□□ 0.51
TRAV12-2A0A075B6T6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAV12-2A0A075B6T6 AP004609.3-201ENST00000610705 1884 ntBASIC18.26■□□□□ 0.51
TRAV12-2A0A075B6T6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV12-2A0A075B6T6 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV12-2A0A075B6T6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAV12-2A0A075B6T6 CR559946.2-201ENST00000623684 991 ntBASIC18.26■□□□□ 0.51
TRAV12-2A0A075B6T6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV12-2A0A075B6T6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV12-2A0A075B6T6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV12-2A0A075B6T6 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV12-2A0A075B6T6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV12-2A0A075B6T6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV12-2A0A075B6T6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.25■□□□□ 0.51
TRAV12-2A0A075B6T6 AC008813.1-201ENST00000536597 885 ntBASIC18.25■□□□□ 0.51
TRAV12-2A0A075B6T6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV12-2A0A075B6T6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
TRAV12-2A0A075B6T6 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV12-2A0A075B6T6 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV12-2A0A075B6T6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRAV12-2A0A075B6T6 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV12-2A0A075B6T6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV12-2A0A075B6T6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV12-2A0A075B6T6 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV12-2A0A075B6T6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV12-2A0A075B6T6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV12-2A0A075B6T6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV12-2A0A075B6T6 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV12-2A0A075B6T6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV12-2A0A075B6T6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV12-2A0A075B6T6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRAV12-2A0A075B6T6 MIR219A2-201ENST00000608502 1504 ntBASIC18.23■□□□□ 0.51
TRAV12-2A0A075B6T6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TRAV12-2A0A075B6T6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TRAV12-2A0A075B6T6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV12-2A0A075B6T6 HLA-V-202ENST00000446817 847 ntBASIC18.22■□□□□ 0.51
TRAV12-2A0A075B6T6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRAV12-2A0A075B6T6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.22■□□□□ 0.51
TRAV12-2A0A075B6T6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRAV12-2A0A075B6T6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV12-2A0A075B6T6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV12-2A0A075B6T6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV12-2A0A075B6T6 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV12-2A0A075B6T6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.21■□□□□ 0.5
TRAV12-2A0A075B6T6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV12-2A0A075B6T6 MIR3648-2-201ENST00000581792 180 ntBASIC18.2■□□□□ 0.5
TRAV12-2A0A075B6T6 MIR7108-201ENST00000614319 87 ntBASIC18.2■□□□□ 0.5
TRAV12-2A0A075B6T6 MIR3648-1-201ENST00000615959 180 ntBASIC18.2■□□□□ 0.5
TRAV12-2A0A075B6T6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV12-2A0A075B6T6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV12-2A0A075B6T6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV12-2A0A075B6T6 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV12-2A0A075B6T6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV12-2A0A075B6T6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV12-2A0A075B6T6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV12-2A0A075B6T6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAV12-2A0A075B6T6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAV12-2A0A075B6T6 AC016575.1-201ENST00000607026 382 ntBASIC18.19■□□□□ 0.5
TRAV12-2A0A075B6T6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAV12-2A0A075B6T6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV12-2A0A075B6T6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV12-2A0A075B6T6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV12-2A0A075B6T6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV12-2A0A075B6T6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV12-2A0A075B6T6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAV12-2A0A075B6T6 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV12-2A0A075B6T6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV12-2A0A075B6T6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV12-2A0A075B6T6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV12-2A0A075B6T6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TRAV12-2A0A075B6T6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV12-2A0A075B6T6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV12-2A0A075B6T6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV12-2A0A075B6T6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.17■□□□□ 0.5
TRAV12-2A0A075B6T6 AC148477.6-201ENST00000623746 465 ntBASIC18.17■□□□□ 0.5
TRAV12-2A0A075B6T6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV12-2A0A075B6T6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV12-2A0A075B6T6 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV12-2A0A075B6T6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV12-2A0A075B6T6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.17■□□□□ 0.5
TRAV12-2A0A075B6T6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV12-2A0A075B6T6 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV12-2A0A075B6T6 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV12-2A0A075B6T6 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRAV12-2A0A075B6T6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.16■□□□□ 0.5
TRAV12-2A0A075B6T6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV12-2A0A075B6T6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV12-2A0A075B6T6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV12-2A0A075B6T6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV12-2A0A075B6T6 AC142472.1-201ENST00000612013 1741 ntBASIC18.15■□□□□ 0.5
TRAV12-2A0A075B6T6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV12-2A0A075B6T6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV12-2A0A075B6T6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.15■□□□□ 0.5
TRAV12-2A0A075B6T6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.14■□□□□ 0.5
TRAV12-2A0A075B6T6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV12-2A0A075B6T6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV12-2A0A075B6T6 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAV12-2A0A075B6T6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TRAV12-2A0A075B6T6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV12-2A0A075B6T6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms