Protein–RNA interactions for Protein: A0A075B6M9

TRBV23OR9-2, T-cell receptor beta variable 23/OR9-2 (pseudogene) (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23OR9-2A0A075B6M9 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRBV23OR9-2A0A075B6M9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRBV23OR9-2A0A075B6M9 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TRBV23OR9-2A0A075B6M9 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
TRBV23OR9-2A0A075B6M9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.47
TRBV23OR9-2A0A075B6M9 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.2■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.19■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.17■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.17■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 AC007029.1-201ENST00000604183 313 ntBASIC24.16■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.15■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.15■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 WHAMMP3-201ENST00000611636 1609 ntBASIC24.15■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.15■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 AC012354.3-201ENST00000623734 483 ntBASIC24.15■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.15■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
TRBV23OR9-2A0A075B6M9 KRT18P60-201ENST00000312876 1297 ntBASIC24.14■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 AL033527.3-201ENST00000566366 1196 ntBASIC24.14■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.14■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.13■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 AC133552.2-201ENST00000619106 1032 ntBASIC24.12■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.11■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.11■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.11■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 AL359504.2-201ENST00000605506 1601 ntBASIC24.1■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 AC025884.2-201ENST00000553429 711 ntBASIC24.1■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 LINC01003-201ENST00000564834 1764 ntBASIC24.09■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 AC009831.1-201ENST00000580420 1582 ntBASIC24.09■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.08■■□□□ 1.45
TRBV23OR9-2A0A075B6M9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.08■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 AL592293.1-201ENST00000502889 1188 ntBASIC24.07■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.06■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.06■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.05■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 AC004987.1-201ENST00000428627 508 ntBASIC24.05■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 RP9P-202ENST00000450133 1212 ntBASIC24.05■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.05■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 AC093536.1-201ENST00000569153 554 ntBASIC24.05■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 AC026202.3-201ENST00000600805 1127 ntBASIC24.05■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.04■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.04■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TRBV23OR9-2A0A075B6M9 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms