Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 AC132938.6-201ENST00000623828 1655 ntBASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 AL096828.2-201ENST00000567259 1965 ntBASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 AC009154.2-201ENST00000621177 724 ntBASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNX9Q9Y5X1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX9Q9Y5X1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX9Q9Y5X1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX9Q9Y5X1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX9Q9Y5X1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SNX9Q9Y5X1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX9Q9Y5X1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SNX9Q9Y5X1 AC068472.1-201ENST00000474589 881 ntBASIC19.35■□□□□ 0.69
SNX9Q9Y5X1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.35■□□□□ 0.69
SNX9Q9Y5X1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.35■□□□□ 0.69
SNX9Q9Y5X1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SNX9Q9Y5X1 AP000867.3-201ENST00000524675 377 ntBASIC19.35■□□□□ 0.69
SNX9Q9Y5X1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX9Q9Y5X1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX9Q9Y5X1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.35■□□□□ 0.69
SNX9Q9Y5X1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.35■□□□□ 0.69
SNX9Q9Y5X1 AC093010.1-201ENST00000473625 1624 ntBASIC19.35■□□□□ 0.69
SNX9Q9Y5X1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNX9Q9Y5X1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX9Q9Y5X1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SNX9Q9Y5X1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.35■□□□□ 0.69
SNX9Q9Y5X1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 KRT18P65-201ENST00000439811 1286 ntBASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SNX9Q9Y5X1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
SNX9Q9Y5X1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SNX9Q9Y5X1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.33■□□□□ 0.69
SNX9Q9Y5X1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SNX9Q9Y5X1 AC233702.3-201ENST00000578656 1387 ntBASIC19.33■□□□□ 0.69
SNX9Q9Y5X1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms