Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 AC093010.1-201ENST00000473625 1624 ntBASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 ABALON-201ENST00000629058 1903 ntBASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 GPR32P1-201ENST00000601788 811 ntBASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 AC004263.2-201ENST00000617183 678 ntBASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 LINC00602-201ENST00000629776 2065 ntBASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAI2Q9Y5P3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 Z83836.1-201ENST00000624605 1642 ntBASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 AC011498.5-201ENST00000592027 486 ntBASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 REXO1L9P-201ENST00000604264 2108 ntBASIC18.31■□□□□ 0.52
RAI2Q9Y5P3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 AL390719.2-201ENST00000606993 987 ntBASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 AL354751.1-201ENST00000412768 1863 ntBASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 LINC00167-201ENST00000530583 1419 ntBASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.3■□□□□ 0.52
RAI2Q9Y5P3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms