Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHB11Q9Y5F2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB11Q9Y5F2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB11Q9Y5F2 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PCDHB11Q9Y5F2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDHB11Q9Y5F2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDHB11Q9Y5F2 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB11Q9Y5F2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB11Q9Y5F2 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB11Q9Y5F2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB11Q9Y5F2 NUS1P1-201ENST00000446295 882 ntBASIC17.76■□□□□ 0.43
PCDHB11Q9Y5F2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHB11Q9Y5F2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHB11Q9Y5F2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB11Q9Y5F2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHB11Q9Y5F2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDHB11Q9Y5F2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB11Q9Y5F2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB11Q9Y5F2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHB11Q9Y5F2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
PCDHB11Q9Y5F2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 HLA-F-220ENST00000434407 884 ntBASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 AP002414.4-201ENST00000589764 1148 ntBASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 NOC2LP1-202ENST00000452600 2235 ntBASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB11Q9Y5F2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 KRT18P1-202ENST00000452408 1331 ntBASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 CHCHD2P8-201ENST00000429873 447 ntBASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 AC246785.2-201ENST00000432512 513 ntBASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 PVRIG2P-201ENST00000435460 978 ntBASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 SDHAP2-201ENST00000455183 2001 ntBASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 AL162741.1-201ENST00000565563 1558 ntBASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
PCDHB11Q9Y5F2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PCDHB11Q9Y5F2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.73■□□□□ 0.43
PCDHB11Q9Y5F2 AL391807.1-203ENST00000604392 2365 ntBASIC17.73■□□□□ 0.43
PCDHB11Q9Y5F2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms