Protein–RNA interactions for Protein: Q9UPT9

USP22, Ubiquitin carboxyl-terminal hydrolase 22, humanhuman

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP22Q9UPT9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP22Q9UPT9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.12■□□□□ 0.33
USP22Q9UPT9 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.12■□□□□ 0.33
USP22Q9UPT9 MIR3180-5-201ENST00000583743 153 ntBASIC17.12■□□□□ 0.33
USP22Q9UPT9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
USP22Q9UPT9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.12■□□□□ 0.33
USP22Q9UPT9 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP22Q9UPT9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP22Q9UPT9 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP22Q9UPT9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP22Q9UPT9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
USP22Q9UPT9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.12■□□□□ 0.33
USP22Q9UPT9 NKILA-202ENST00000614771 2598 ntBASIC17.12■□□□□ 0.33
USP22Q9UPT9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
USP22Q9UPT9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP22Q9UPT9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP22Q9UPT9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP22Q9UPT9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.12■□□□□ 0.33
USP22Q9UPT9 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP22Q9UPT9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.11■□□□□ 0.33
USP22Q9UPT9 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP22Q9UPT9 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.11■□□□□ 0.33
USP22Q9UPT9 LINC00602-201ENST00000629776 2065 ntBASIC17.11■□□□□ 0.33
USP22Q9UPT9 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP22Q9UPT9 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP22Q9UPT9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.11■□□□□ 0.33
USP22Q9UPT9 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP22Q9UPT9 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP22Q9UPT9 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP22Q9UPT9 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP22Q9UPT9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP22Q9UPT9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.11■□□□□ 0.33
USP22Q9UPT9 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.11■□□□□ 0.33
USP22Q9UPT9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP22Q9UPT9 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP22Q9UPT9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.11■□□□□ 0.33
USP22Q9UPT9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.11■□□□□ 0.33
USP22Q9UPT9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
USP22Q9UPT9 RARRES2P10-201ENST00000564312 460 ntBASIC17.11■□□□□ 0.33
USP22Q9UPT9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.11■□□□□ 0.33
USP22Q9UPT9 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP22Q9UPT9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP22Q9UPT9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.11■□□□□ 0.33
USP22Q9UPT9 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP22Q9UPT9 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP22Q9UPT9 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP22Q9UPT9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP22Q9UPT9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP22Q9UPT9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.11■□□□□ 0.33
USP22Q9UPT9 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.11■□□□□ 0.33
USP22Q9UPT9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.11■□□□□ 0.33
USP22Q9UPT9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP22Q9UPT9 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP22Q9UPT9 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP22Q9UPT9 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.11■□□□□ 0.33
USP22Q9UPT9 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.11■□□□□ 0.33
USP22Q9UPT9 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP22Q9UPT9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP22Q9UPT9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP22Q9UPT9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP22Q9UPT9 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP22Q9UPT9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP22Q9UPT9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP22Q9UPT9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP22Q9UPT9 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP22Q9UPT9 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.1■□□□□ 0.33
USP22Q9UPT9 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP22Q9UPT9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
USP22Q9UPT9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP22Q9UPT9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.1■□□□□ 0.33
USP22Q9UPT9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.1■□□□□ 0.33
USP22Q9UPT9 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.1■□□□□ 0.33
USP22Q9UPT9 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
USP22Q9UPT9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.1■□□□□ 0.33
USP22Q9UPT9 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.1■□□□□ 0.33
USP22Q9UPT9 AP006294.2-201ENST00000641667 209 ntBASIC17.1■□□□□ 0.33
USP22Q9UPT9 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP22Q9UPT9 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
USP22Q9UPT9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP22Q9UPT9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP22Q9UPT9 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP22Q9UPT9 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.1■□□□□ 0.33
USP22Q9UPT9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP22Q9UPT9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP22Q9UPT9 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP22Q9UPT9 AL023806.1-201ENST00000603994 1649 ntBASIC17.1■□□□□ 0.33
USP22Q9UPT9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP22Q9UPT9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP22Q9UPT9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP22Q9UPT9 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
USP22Q9UPT9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP22Q9UPT9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP22Q9UPT9 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.1■□□□□ 0.33
USP22Q9UPT9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.1■□□□□ 0.33
USP22Q9UPT9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
USP22Q9UPT9 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
USP22Q9UPT9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP22Q9UPT9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.09■□□□□ 0.33
USP22Q9UPT9 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP22Q9UPT9 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms