Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CPNE7Q9UBL6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE7Q9UBL6 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE7Q9UBL6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CPNE7Q9UBL6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.54■□□□□ 0.4
CPNE7Q9UBL6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE7Q9UBL6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.54■□□□□ 0.4
CPNE7Q9UBL6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.54■□□□□ 0.4
CPNE7Q9UBL6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.54■□□□□ 0.4
CPNE7Q9UBL6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.54■□□□□ 0.4
CPNE7Q9UBL6 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.54■□□□□ 0.4
CPNE7Q9UBL6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.54■□□□□ 0.4
CPNE7Q9UBL6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.54■□□□□ 0.4
CPNE7Q9UBL6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE7Q9UBL6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE7Q9UBL6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE7Q9UBL6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CPNE7Q9UBL6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE7Q9UBL6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE7Q9UBL6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE7Q9UBL6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CPNE7Q9UBL6 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 KRT16P4-201ENST00000453883 522 ntBASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.53■□□□□ 0.4
CPNE7Q9UBL6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 NUS1P2-201ENST00000417358 873 ntBASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 POM121L3P-201ENST00000419331 1163 ntBASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE7Q9UBL6 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
CPNE7Q9UBL6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CPNE7Q9UBL6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CPNE7Q9UBL6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CPNE7Q9UBL6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CPNE7Q9UBL6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CPNE7Q9UBL6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.52■□□□□ 0.39
CPNE7Q9UBL6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CPNE7Q9UBL6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CPNE7Q9UBL6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms