Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCM2LQ9NUG4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCM2LQ9NUG4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CCM2LQ9NUG4 FAM197Y1-201ENST00000421178 764 ntBASIC17.27■□□□□ 0.36
CCM2LQ9NUG4 KRT18P57-201ENST00000443599 1254 ntBASIC17.27■□□□□ 0.36
CCM2LQ9NUG4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCM2LQ9NUG4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCM2LQ9NUG4 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.27■□□□□ 0.36
CCM2LQ9NUG4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.27■□□□□ 0.36
CCM2LQ9NUG4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCM2LQ9NUG4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.27■□□□□ 0.36
CCM2LQ9NUG4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCM2LQ9NUG4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCM2LQ9NUG4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCM2LQ9NUG4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCM2LQ9NUG4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCM2LQ9NUG4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCM2LQ9NUG4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.27■□□□□ 0.35
CCM2LQ9NUG4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCM2LQ9NUG4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCM2LQ9NUG4 GMCL1P1-201ENST00000463439 1581 ntBASIC17.27■□□□□ 0.35
CCM2LQ9NUG4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.35
CCM2LQ9NUG4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCM2LQ9NUG4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCM2LQ9NUG4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.26■□□□□ 0.35
CCM2LQ9NUG4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2LQ9NUG4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.26■□□□□ 0.35
CCM2LQ9NUG4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2LQ9NUG4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2LQ9NUG4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2LQ9NUG4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2LQ9NUG4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CCM2LQ9NUG4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.26■□□□□ 0.35
CCM2LQ9NUG4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.26■□□□□ 0.35
CCM2LQ9NUG4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.26■□□□□ 0.35
CCM2LQ9NUG4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.26■□□□□ 0.35
CCM2LQ9NUG4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2LQ9NUG4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2LQ9NUG4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2LQ9NUG4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.26■□□□□ 0.35
CCM2LQ9NUG4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2LQ9NUG4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2LQ9NUG4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CCM2LQ9NUG4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2LQ9NUG4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2LQ9NUG4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2LQ9NUG4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2LQ9NUG4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.26■□□□□ 0.35
CCM2LQ9NUG4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCM2LQ9NUG4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2LQ9NUG4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCM2LQ9NUG4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 AC011676.5-201ENST00000624864 2660 ntBASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 LINC00602-201ENST00000629776 2065 ntBASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 Z85996.1-201ENST00000494644 937 ntBASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCM2LQ9NUG4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCM2LQ9NUG4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms