Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 AC096582.2-201ENST00000510860 516 ntBASIC18.73■□□□□ 0.59
HPS4Q9NQG7 RNA5SP419-201ENST00000515908 135 ntBASIC18.73■□□□□ 0.59
HPS4Q9NQG7 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 AL591684.3-201ENST00000605187 298 ntBASIC18.73■□□□□ 0.59
HPS4Q9NQG7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPS4Q9NQG7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 AL024508.2-201ENST00000607749 1894 ntBASIC18.72■□□□□ 0.59
HPS4Q9NQG7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 AC005336.2-201ENST00000593183 939 ntBASIC18.72■□□□□ 0.59
HPS4Q9NQG7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 AC114341.1-201ENST00000618070 349 ntBASIC18.72■□□□□ 0.59
HPS4Q9NQG7 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.72■□□□□ 0.59
HPS4Q9NQG7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HPS4Q9NQG7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HPS4Q9NQG7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HPS4Q9NQG7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.71■□□□□ 0.59
HPS4Q9NQG7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HPS4Q9NQG7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.71■□□□□ 0.59
HPS4Q9NQG7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HPS4Q9NQG7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HPS4Q9NQG7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HPS4Q9NQG7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.71■□□□□ 0.59
HPS4Q9NQG7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HPS4Q9NQG7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HPS4Q9NQG7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HPS4Q9NQG7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HPS4Q9NQG7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.71■□□□□ 0.59
HPS4Q9NQG7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HPS4Q9NQG7 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.71■□□□□ 0.59
HPS4Q9NQG7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.71■□□□□ 0.59
HPS4Q9NQG7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.71■□□□□ 0.59
HPS4Q9NQG7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.71■□□□□ 0.59
HPS4Q9NQG7 AC120114.3-201ENST00000611923 658 ntBASIC18.71■□□□□ 0.59
HPS4Q9NQG7 AC023511.2-201ENST00000618803 211 ntBASIC18.71■□□□□ 0.59
HPS4Q9NQG7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.71■□□□□ 0.59
HPS4Q9NQG7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HPS4Q9NQG7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HPS4Q9NQG7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HPS4Q9NQG7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HPS4Q9NQG7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HPS4Q9NQG7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
HPS4Q9NQG7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
HPS4Q9NQG7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
HPS4Q9NQG7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HPS4Q9NQG7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms