Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
KCNMB3Q9NPA1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.32■□□□□ 0.84
KCNMB3Q9NPA1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.32■□□□□ 0.84
KCNMB3Q9NPA1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KCNMB3Q9NPA1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
KCNMB3Q9NPA1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.32■□□□□ 0.84
KCNMB3Q9NPA1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KCNMB3Q9NPA1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KCNMB3Q9NPA1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KCNMB3Q9NPA1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 AC091607.1-201ENST00000490318 1060 ntBASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 AP005901.3-202ENST00000581653 237 ntBASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KCNMB3Q9NPA1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 AC246785.2-201ENST00000432512 513 ntBASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
KCNMB3Q9NPA1 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KCNMB3Q9NPA1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.29■□□□□ 0.84
KCNMB3Q9NPA1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.29■□□□□ 0.84
KCNMB3Q9NPA1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KCNMB3Q9NPA1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNMB3Q9NPA1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
KCNMB3Q9NPA1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNMB3Q9NPA1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KCNMB3Q9NPA1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
KCNMB3Q9NPA1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNMB3Q9NPA1 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
KCNMB3Q9NPA1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNMB3Q9NPA1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KCNMB3Q9NPA1 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.29■□□□□ 0.84
KCNMB3Q9NPA1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.29■□□□□ 0.84
KCNMB3Q9NPA1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
KCNMB3Q9NPA1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.29■□□□□ 0.84
KCNMB3Q9NPA1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.29■□□□□ 0.84
KCNMB3Q9NPA1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.29■□□□□ 0.84
KCNMB3Q9NPA1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KCNMB3Q9NPA1 KRT8P47-201ENST00000604727 1398 ntBASIC20.29■□□□□ 0.84
KCNMB3Q9NPA1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KCNMB3Q9NPA1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms