Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.45■□□□□ 0.38
LRTM1Q9HBL6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.45■□□□□ 0.38
LRTM1Q9HBL6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
LRTM1Q9HBL6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRTM1Q9HBL6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRTM1Q9HBL6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRTM1Q9HBL6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
LRTM1Q9HBL6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRTM1Q9HBL6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRTM1Q9HBL6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRTM1Q9HBL6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
LRTM1Q9HBL6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.45■□□□□ 0.38
LRTM1Q9HBL6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.45■□□□□ 0.38
LRTM1Q9HBL6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.45■□□□□ 0.38
LRTM1Q9HBL6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.45■□□□□ 0.38
LRTM1Q9HBL6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRTM1Q9HBL6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRTM1Q9HBL6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
LRTM1Q9HBL6 KRT18P55-202ENST00000578578 1546 ntBASIC17.45■□□□□ 0.38
LRTM1Q9HBL6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LRTM1Q9HBL6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRTM1Q9HBL6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRTM1Q9HBL6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRTM1Q9HBL6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
LRTM1Q9HBL6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRTM1Q9HBL6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRTM1Q9HBL6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.45■□□□□ 0.38
LRTM1Q9HBL6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 INGX-201ENST00000359239 846 ntBASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 AC128688.1-201ENST00000487626 519 ntBASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 AC006116.8-202ENST00000587620 1550 ntBASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRTM1Q9HBL6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRTM1Q9HBL6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRTM1Q9HBL6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms