Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
USP29Q9HBJ7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP29Q9HBJ7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.68■□□□□ 0.58
USP29Q9HBJ7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP29Q9HBJ7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
USP29Q9HBJ7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
USP29Q9HBJ7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP29Q9HBJ7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP29Q9HBJ7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP29Q9HBJ7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.68■□□□□ 0.58
USP29Q9HBJ7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.68■□□□□ 0.58
USP29Q9HBJ7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.68■□□□□ 0.58
USP29Q9HBJ7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
USP29Q9HBJ7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP29Q9HBJ7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP29Q9HBJ7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP29Q9HBJ7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP29Q9HBJ7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP29Q9HBJ7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP29Q9HBJ7 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP29Q9HBJ7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP29Q9HBJ7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP29Q9HBJ7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP29Q9HBJ7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP29Q9HBJ7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP29Q9HBJ7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP29Q9HBJ7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.67■□□□□ 0.58
USP29Q9HBJ7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP29Q9HBJ7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP29Q9HBJ7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP29Q9HBJ7 GNAS-203ENST00000306120 1878 ntBASIC18.67■□□□□ 0.58
USP29Q9HBJ7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP29Q9HBJ7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP29Q9HBJ7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.67■□□□□ 0.58
USP29Q9HBJ7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP29Q9HBJ7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP29Q9HBJ7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.67■□□□□ 0.58
USP29Q9HBJ7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.67■□□□□ 0.58
USP29Q9HBJ7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.67■□□□□ 0.58
USP29Q9HBJ7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.67■□□□□ 0.58
USP29Q9HBJ7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP29Q9HBJ7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.67■□□□□ 0.58
USP29Q9HBJ7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP29Q9HBJ7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.67■□□□□ 0.58
USP29Q9HBJ7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.67■□□□□ 0.58
USP29Q9HBJ7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.67■□□□□ 0.58
USP29Q9HBJ7 NEK4P2-201ENST00000580004 1012 ntBASIC18.67■□□□□ 0.58
USP29Q9HBJ7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
USP29Q9HBJ7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.67■□□□□ 0.58
USP29Q9HBJ7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP29Q9HBJ7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.67■□□□□ 0.58
USP29Q9HBJ7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.67■□□□□ 0.58
USP29Q9HBJ7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP29Q9HBJ7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 LINC00896-202ENST00000609602 2128 ntBASIC18.66■□□□□ 0.58
USP29Q9HBJ7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
USP29Q9HBJ7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
USP29Q9HBJ7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP29Q9HBJ7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.65■□□□□ 0.58
USP29Q9HBJ7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
USP29Q9HBJ7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP29Q9HBJ7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.65■□□□□ 0.58
USP29Q9HBJ7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP29Q9HBJ7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP29Q9HBJ7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.65■□□□□ 0.58
USP29Q9HBJ7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.65■□□□□ 0.58
USP29Q9HBJ7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.65■□□□□ 0.58
USP29Q9HBJ7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
USP29Q9HBJ7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms