Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HIPK3Q9H422 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIPK3Q9H422 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.75■□□□□ 0.75
HIPK3Q9H422 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIPK3Q9H422 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HIPK3Q9H422 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIPK3Q9H422 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.75■□□□□ 0.75
HIPK3Q9H422 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.74■□□□□ 0.75
HIPK3Q9H422 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.74■□□□□ 0.75
HIPK3Q9H422 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
HIPK3Q9H422 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.74■□□□□ 0.75
HIPK3Q9H422 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HIPK3Q9H422 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
HIPK3Q9H422 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HIPK3Q9H422 LINC01126-201ENST00000623515 1646 ntBASIC19.74■□□□□ 0.75
HIPK3Q9H422 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HIPK3Q9H422 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
HIPK3Q9H422 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HIPK3Q9H422 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.74■□□□□ 0.75
HIPK3Q9H422 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.74■□□□□ 0.75
HIPK3Q9H422 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HIPK3Q9H422 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.74■□□□□ 0.75
HIPK3Q9H422 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HIPK3Q9H422 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.74■□□□□ 0.75
HIPK3Q9H422 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.74■□□□□ 0.75
HIPK3Q9H422 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.74■□□□□ 0.75
HIPK3Q9H422 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.74■□□□□ 0.75
HIPK3Q9H422 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.74■□□□□ 0.75
HIPK3Q9H422 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.74■□□□□ 0.75
HIPK3Q9H422 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HIPK3Q9H422 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
HIPK3Q9H422 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HIPK3Q9H422 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HIPK3Q9H422 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HIPK3Q9H422 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.74■□□□□ 0.75
HIPK3Q9H422 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HIPK3Q9H422 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HIPK3Q9H422 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.74■□□□□ 0.75
HIPK3Q9H422 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.74■□□□□ 0.75
HIPK3Q9H422 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HIPK3Q9H422 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
HIPK3Q9H422 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.74■□□□□ 0.75
HIPK3Q9H422 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
HIPK3Q9H422 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.73■□□□□ 0.75
HIPK3Q9H422 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HIPK3Q9H422 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HIPK3Q9H422 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.73■□□□□ 0.75
HIPK3Q9H422 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HIPK3Q9H422 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIPK3Q9H422 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HIPK3Q9H422 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIPK3Q9H422 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HIPK3Q9H422 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HIPK3Q9H422 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.73■□□□□ 0.75
HIPK3Q9H422 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.73■□□□□ 0.75
HIPK3Q9H422 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
HIPK3Q9H422 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
HIPK3Q9H422 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.73■□□□□ 0.75
HIPK3Q9H422 MTDHP5-201ENST00000598980 586 ntBASIC19.73■□□□□ 0.75
HIPK3Q9H422 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.73■□□□□ 0.75
HIPK3Q9H422 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.73■□□□□ 0.75
HIPK3Q9H422 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIPK3Q9H422 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HIPK3Q9H422 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIPK3Q9H422 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIPK3Q9H422 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIPK3Q9H422 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIPK3Q9H422 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HIPK3Q9H422 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIPK3Q9H422 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIPK3Q9H422 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.72■□□□□ 0.75
HIPK3Q9H422 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIPK3Q9H422 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIPK3Q9H422 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIPK3Q9H422 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.72■□□□□ 0.75
HIPK3Q9H422 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIPK3Q9H422 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.72■□□□□ 0.75
HIPK3Q9H422 BX005266.1-201ENST00000473402 457 ntBASIC19.72■□□□□ 0.75
HIPK3Q9H422 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.72■□□□□ 0.75
HIPK3Q9H422 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HIPK3Q9H422 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.72■□□□□ 0.75
HIPK3Q9H422 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.72■□□□□ 0.75
HIPK3Q9H422 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.72■□□□□ 0.75
HIPK3Q9H422 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.72■□□□□ 0.75
HIPK3Q9H422 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIPK3Q9H422 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.72■□□□□ 0.75
HIPK3Q9H422 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HIPK3Q9H422 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIPK3Q9H422 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIPK3Q9H422 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HIPK3Q9H422 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIPK3Q9H422 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.71■□□□□ 0.75
HIPK3Q9H422 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
HIPK3Q9H422 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIPK3Q9H422 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
HIPK3Q9H422 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIPK3Q9H422 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
HIPK3Q9H422 AC211486.1-202ENST00000416371 468 ntBASIC19.71■□□□□ 0.75
HIPK3Q9H422 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.71■□□□□ 0.75
HIPK3Q9H422 AC211476.1-201ENST00000503899 468 ntBASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms