Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCGF1Q9BSM1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.22■□□□□ 0.03
PCGF1Q9BSM1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCGF1Q9BSM1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.22■□□□□ 0.03
PCGF1Q9BSM1 AC093458.2-201ENST00000623150 629 ntBASIC15.22■□□□□ 0.03
PCGF1Q9BSM1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.22■□□□□ 0.03
PCGF1Q9BSM1 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCGF1Q9BSM1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PCGF1Q9BSM1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCGF1Q9BSM1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCGF1Q9BSM1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.22■□□□□ 0.03
PCGF1Q9BSM1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCGF1Q9BSM1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCGF1Q9BSM1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.22■□□□□ 0.03
PCGF1Q9BSM1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCGF1Q9BSM1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.22■□□□□ 0.03
PCGF1Q9BSM1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.22■□□□□ 0.03
PCGF1Q9BSM1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCGF1Q9BSM1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.22■□□□□ 0.03
PCGF1Q9BSM1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCGF1Q9BSM1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PCGF1Q9BSM1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 NOC2LP2-201ENST00000407594 1944 ntBASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 HOXB1-202ENST00000577092 1414 ntBASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 MIR3917-201ENST00000580971 93 ntBASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 AC010240.3-201ENST00000607688 395 ntBASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 AL357033.4-201ENST00000617703 1807 ntBASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCGF1Q9BSM1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.21■□□□□ 0.02
PCGF1Q9BSM1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PCGF1Q9BSM1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.21■□□□□ 0.02
PCGF1Q9BSM1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
PCGF1Q9BSM1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
PCGF1Q9BSM1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
PCGF1Q9BSM1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCGF1Q9BSM1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCGF1Q9BSM1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 HBZP1-201ENST00000354915 429 ntBASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 AC104390.1-201ENST00000555663 520 ntBASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 AL136038.3-201ENST00000561909 1096 ntBASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 HYMAI.1-201ENST00000620949 238 ntBASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.2■□□□□ 0.02
PCGF1Q9BSM1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.19■□□□□ 0.02
PCGF1Q9BSM1 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms