Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 AC092338.2-201ENST00000568827 1415 ntBASIC17.04■□□□□ 0.32
CPPED1Q9BRF8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPPED1Q9BRF8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPPED1Q9BRF8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CPPED1Q9BRF8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPPED1Q9BRF8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CPPED1Q9BRF8 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.03■□□□□ 0.32
CPPED1Q9BRF8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPPED1Q9BRF8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPPED1Q9BRF8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPPED1Q9BRF8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CPPED1Q9BRF8 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.03■□□□□ 0.32
CPPED1Q9BRF8 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
CPPED1Q9BRF8 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.03■□□□□ 0.32
CPPED1Q9BRF8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.03■□□□□ 0.32
CPPED1Q9BRF8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.03■□□□□ 0.32
CPPED1Q9BRF8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.03■□□□□ 0.32
CPPED1Q9BRF8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CPPED1Q9BRF8 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.03■□□□□ 0.32
CPPED1Q9BRF8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPPED1Q9BRF8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
CPPED1Q9BRF8 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPPED1Q9BRF8 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CPPED1Q9BRF8 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPPED1Q9BRF8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.03■□□□□ 0.32
CPPED1Q9BRF8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CPPED1Q9BRF8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CPPED1Q9BRF8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 AC138932.1-201ENST00000534164 6830 ntBASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 AC133963.1-201ENST00000504166 1679 ntBASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 UBE2SP1-201ENST00000450587 669 ntBASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 TSPY20P-201ENST00000450910 630 ntBASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 AC010240.3-201ENST00000607688 395 ntBASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CPPED1Q9BRF8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CPPED1Q9BRF8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CPPED1Q9BRF8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CPPED1Q9BRF8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CPPED1Q9BRF8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.02■□□□□ 0.31
CPPED1Q9BRF8 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CPPED1Q9BRF8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.02■□□□□ 0.31
CPPED1Q9BRF8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CPPED1Q9BRF8 AL138688.1-201ENST00000624851 1594 ntBASIC17.02■□□□□ 0.31
CPPED1Q9BRF8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CPPED1Q9BRF8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CPPED1Q9BRF8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CPPED1Q9BRF8 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CPPED1Q9BRF8 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPPED1Q9BRF8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.01■□□□□ 0.31
CPPED1Q9BRF8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.01■□□□□ 0.31
CPPED1Q9BRF8 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CPPED1Q9BRF8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CPPED1Q9BRF8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPPED1Q9BRF8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPPED1Q9BRF8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPPED1Q9BRF8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CPPED1Q9BRF8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.01■□□□□ 0.31
CPPED1Q9BRF8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CPPED1Q9BRF8 GCSHP5-201ENST00000443090 522 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms