Protein–RNA interactions for Protein: Q99954

SMR3A, Submaxillary gland androgen-regulated protein 3A, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMR3AQ99954 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMR3AQ99954 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMR3AQ99954 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMR3AQ99954 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMR3AQ99954 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMR3AQ99954 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SMR3AQ99954 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SMR3AQ99954 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SMR3AQ99954 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMR3AQ99954 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMR3AQ99954 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.64□□□□□ -0.07
SMR3AQ99954 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SMR3AQ99954 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SMR3AQ99954 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMR3AQ99954 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SMR3AQ99954 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMR3AQ99954 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMR3AQ99954 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.64□□□□□ -0.07
SMR3AQ99954 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMR3AQ99954 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SMR3AQ99954 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SMR3AQ99954 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMR3AQ99954 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
SMR3AQ99954 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMR3AQ99954 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMR3AQ99954 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
SMR3AQ99954 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.64□□□□□ -0.07
SMR3AQ99954 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMR3AQ99954 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SMR3AQ99954 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SMR3AQ99954 AC004461.1-201ENST00000412461 403 ntBASIC14.64□□□□□ -0.07
SMR3AQ99954 IGLL3P-201ENST00000412472 434 ntBASIC14.64□□□□□ -0.07
SMR3AQ99954 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.64□□□□□ -0.07
SMR3AQ99954 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SMR3AQ99954 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SMR3AQ99954 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SMR3AQ99954 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.64□□□□□ -0.07
SMR3AQ99954 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.64□□□□□ -0.07
SMR3AQ99954 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.64□□□□□ -0.07
SMR3AQ99954 AC093214.1-201ENST00000511688 1107 ntBASIC14.64□□□□□ -0.07
SMR3AQ99954 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.64□□□□□ -0.07
SMR3AQ99954 AC025678.2-201ENST00000562061 970 ntBASIC14.64□□□□□ -0.07
SMR3AQ99954 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.64□□□□□ -0.07
SMR3AQ99954 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.64□□□□□ -0.07
SMR3AQ99954 Z92544.3-201ENST00000624747 417 ntBASIC14.64□□□□□ -0.07
SMR3AQ99954 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SMR3AQ99954 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.64□□□□□ -0.07
SMR3AQ99954 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SMR3AQ99954 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SMR3AQ99954 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.64□□□□□ -0.07
SMR3AQ99954 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SMR3AQ99954 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.64□□□□□ -0.07
SMR3AQ99954 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SMR3AQ99954 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.63□□□□□ -0.07
SMR3AQ99954 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
SMR3AQ99954 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SMR3AQ99954 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC14.63□□□□□ -0.07
SMR3AQ99954 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMR3AQ99954 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMR3AQ99954 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMR3AQ99954 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMR3AQ99954 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMR3AQ99954 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SMR3AQ99954 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
SMR3AQ99954 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SMR3AQ99954 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SMR3AQ99954 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SMR3AQ99954 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.63□□□□□ -0.07
SMR3AQ99954 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.63□□□□□ -0.07
SMR3AQ99954 DUX4L17-201ENST00000557360 1267 ntBASIC14.63□□□□□ -0.07
SMR3AQ99954 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.63□□□□□ -0.07
SMR3AQ99954 AL008721.1-201ENST00000609964 604 ntBASIC14.63□□□□□ -0.07
SMR3AQ99954 AC004706.3-202ENST00000621574 984 ntBASIC14.63□□□□□ -0.07
SMR3AQ99954 AC073592.4-201ENST00000623827 446 ntBASIC14.63□□□□□ -0.07
SMR3AQ99954 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SMR3AQ99954 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.63□□□□□ -0.07
SMR3AQ99954 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.63□□□□□ -0.07
SMR3AQ99954 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
SMR3AQ99954 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SMR3AQ99954 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SMR3AQ99954 AL137060.1-201ENST00000618151 2648 ntBASIC14.62□□□□□ -0.07
SMR3AQ99954 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.62□□□□□ -0.07
SMR3AQ99954 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.62□□□□□ -0.07
SMR3AQ99954 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.62□□□□□ -0.07
SMR3AQ99954 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMR3AQ99954 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SMR3AQ99954 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14.62□□□□□ -0.07
SMR3AQ99954 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMR3AQ99954 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
SMR3AQ99954 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMR3AQ99954 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMR3AQ99954 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
SMR3AQ99954 KRT18P65-201ENST00000439811 1286 ntBASIC14.62□□□□□ -0.07
SMR3AQ99954 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
SMR3AQ99954 FAM86GP-201ENST00000448322 971 ntBASIC14.62□□□□□ -0.07
SMR3AQ99954 PRYP5-201ENST00000451909 266 ntBASIC14.62□□□□□ -0.07
SMR3AQ99954 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SMR3AQ99954 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.62□□□□□ -0.07
SMR3AQ99954 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
SMR3AQ99954 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms