Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.31■□□□□ 0.36
CMKLR1Q99788 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.31■□□□□ 0.36
CMKLR1Q99788 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
CMKLR1Q99788 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CMKLR1Q99788 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.31■□□□□ 0.36
CMKLR1Q99788 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CMKLR1Q99788 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.31■□□□□ 0.36
CMKLR1Q99788 AC009154.2-201ENST00000621177 724 ntBASIC17.31■□□□□ 0.36
CMKLR1Q99788 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.31■□□□□ 0.36
CMKLR1Q99788 AF228730.7-201ENST00000641842 219 ntBASIC17.31■□□□□ 0.36
CMKLR1Q99788 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CMKLR1Q99788 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMKLR1Q99788 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMKLR1Q99788 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMKLR1Q99788 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMKLR1Q99788 SDHAP2-201ENST00000455183 2001 ntBASIC17.31■□□□□ 0.36
CMKLR1Q99788 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CMKLR1Q99788 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMKLR1Q99788 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMKLR1Q99788 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.31■□□□□ 0.36
CMKLR1Q99788 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.31■□□□□ 0.36
CMKLR1Q99788 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMKLR1Q99788 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMKLR1Q99788 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMKLR1Q99788 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMKLR1Q99788 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CMKLR1Q99788 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.31■□□□□ 0.36
CMKLR1Q99788 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMKLR1Q99788 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CMKLR1Q99788 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CMKLR1Q99788 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.3■□□□□ 0.36
CMKLR1Q99788 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CMKLR1Q99788 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMKLR1Q99788 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMKLR1Q99788 AP000974.1-201ENST00000623909 2387 ntBASIC17.3■□□□□ 0.36
CMKLR1Q99788 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMKLR1Q99788 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMKLR1Q99788 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CMKLR1Q99788 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMKLR1Q99788 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMKLR1Q99788 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CMKLR1Q99788 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CMKLR1Q99788 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMKLR1Q99788 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CMKLR1Q99788 RBM17P3-201ENST00000417687 1192 ntBASIC17.3■□□□□ 0.36
CMKLR1Q99788 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMKLR1Q99788 SCARNA2-201ENST00000458748 420 ntBASIC17.3■□□□□ 0.36
CMKLR1Q99788 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.3■□□□□ 0.36
CMKLR1Q99788 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.3■□□□□ 0.36
CMKLR1Q99788 RNA5SP419-201ENST00000515908 135 ntBASIC17.3■□□□□ 0.36
CMKLR1Q99788 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.3■□□□□ 0.36
CMKLR1Q99788 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CMKLR1Q99788 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.3■□□□□ 0.36
CMKLR1Q99788 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CMKLR1Q99788 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMKLR1Q99788 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMKLR1Q99788 AC090340.1-201ENST00000620778 4980 ntBASIC17.3■□□□□ 0.36
CMKLR1Q99788 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMKLR1Q99788 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.3■□□□□ 0.36
CMKLR1Q99788 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CMKLR1Q99788 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMKLR1Q99788 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMKLR1Q99788 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMKLR1Q99788 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CMKLR1Q99788 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.3■□□□□ 0.36
CMKLR1Q99788 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMKLR1Q99788 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
CMKLR1Q99788 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMKLR1Q99788 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CMKLR1Q99788 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CMKLR1Q99788 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CMKLR1Q99788 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMKLR1Q99788 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMKLR1Q99788 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.29■□□□□ 0.36
CMKLR1Q99788 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMKLR1Q99788 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMKLR1Q99788 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMKLR1Q99788 RPS2P28-201ENST00000314255 741 ntBASIC17.29■□□□□ 0.36
CMKLR1Q99788 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.29■□□□□ 0.36
CMKLR1Q99788 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.29■□□□□ 0.36
CMKLR1Q99788 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CMKLR1Q99788 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.29■□□□□ 0.36
CMKLR1Q99788 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.29■□□□□ 0.36
CMKLR1Q99788 AC005336.2-201ENST00000593183 939 ntBASIC17.29■□□□□ 0.36
CMKLR1Q99788 AL355877.3-201ENST00000622820 899 ntBASIC17.29■□□□□ 0.36
CMKLR1Q99788 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMKLR1Q99788 AC099343.3-201ENST00000605834 2503 ntBASIC17.29■□□□□ 0.36
CMKLR1Q99788 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CMKLR1Q99788 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMKLR1Q99788 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMKLR1Q99788 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.29■□□□□ 0.36
CMKLR1Q99788 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMKLR1Q99788 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.29■□□□□ 0.36
CMKLR1Q99788 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMKLR1Q99788 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.29■□□□□ 0.36
CMKLR1Q99788 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.28■□□□□ 0.36
CMKLR1Q99788 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CMKLR1Q99788 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CMKLR1Q99788 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CMKLR1Q99788 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms