Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AP005212.1-201ENST00000581547 1997 ntBASIC5.47□□□□□ -1.53
HMCN1Q96RW7 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 SPCS2P4-201ENST00000436160 681 ntBASIC5.47□□□□□ -1.53
HMCN1Q96RW7 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 AC132938.2-201ENST00000579188 680 ntBASIC5.47□□□□□ -1.53
HMCN1Q96RW7 AL158211.3-201ENST00000607385 239 ntBASIC5.47□□□□□ -1.53
HMCN1Q96RW7 AC244093.1-201ENST00000610837 814 ntBASIC5.47□□□□□ -1.53
HMCN1Q96RW7 AC009118.2-201ENST00000613275 655 ntBASIC5.47□□□□□ -1.53
HMCN1Q96RW7 AL591163.1-201ENST00000641757 987 ntBASIC5.47□□□□□ -1.53
HMCN1Q96RW7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 AL024507.2-201ENST00000606070 2574 ntBASIC5.47□□□□□ -1.53
HMCN1Q96RW7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 HINT2P1-201ENST00000419438 481 ntBASIC5.47□□□□□ -1.53
HMCN1Q96RW7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 AC022144.1-201ENST00000602255 1580 ntBASIC5.47□□□□□ -1.53
HMCN1Q96RW7 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 MIR7845-201ENST00000618396 99 ntBASIC5.47□□□□□ -1.53
HMCN1Q96RW7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 AC128714.1-201ENST00000637035 887 ntBASIC5.47□□□□□ -1.53
HMCN1Q96RW7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 NUS1P3-201ENST00000423502 862 ntBASIC5.47□□□□□ -1.53
HMCN1Q96RW7 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 IGHJ2P-201ENST00000454480 60 ntBASIC5.47□□□□□ -1.53
HMCN1Q96RW7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 AC092919.2-201ENST00000623631 1645 ntBASIC5.47□□□□□ -1.53
HMCN1Q96RW7 FP700111.2-201ENST00000619190 1892 ntBASIC5.47□□□□□ -1.53
HMCN1Q96RW7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 SPDYE7P-202ENST00000420373 878 ntBASIC5.47□□□□□ -1.53
HMCN1Q96RW7 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 AC122714.2-201ENST00000502787 707 ntBASIC5.47□□□□□ -1.53
HMCN1Q96RW7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 TUBB1P2-201ENST00000422712 1306 ntBASIC5.47□□□□□ -1.53
HMCN1Q96RW7 TUBB1P1-201ENST00000503144 1300 ntBASIC5.47□□□□□ -1.53
HMCN1Q96RW7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC5.46□□□□□ -1.53
HMCN1Q96RW7 AP006294.1-201ENST00000415407 339 ntBASIC5.46□□□□□ -1.53
HMCN1Q96RW7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC5.46□□□□□ -1.53
HMCN1Q96RW7 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC5.46□□□□□ -1.53
HMCN1Q96RW7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC5.46□□□□□ -1.53
HMCN1Q96RW7 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC5.46□□□□□ -1.53
HMCN1Q96RW7 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC5.46□□□□□ -1.53
HMCN1Q96RW7 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC5.46□□□□□ -1.53
HMCN1Q96RW7 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC5.46□□□□□ -1.53
HMCN1Q96RW7 EMC4-209ENST00000559421 497 ntTSL 2 BASIC5.46□□□□□ -1.53
HMCN1Q96RW7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC5.46□□□□□ -1.53
HMCN1Q96RW7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC5.46□□□□□ -1.53
HMCN1Q96RW7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
HMCN1Q96RW7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC5.46□□□□□ -1.53
HMCN1Q96RW7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
HMCN1Q96RW7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC5.46□□□□□ -1.53
HMCN1Q96RW7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HMCN1Q96RW7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC5.46□□□□□ -1.53
HMCN1Q96RW7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
HMCN1Q96RW7 IGHV3-42-201ENST00000520410 361 ntBASIC5.46□□□□□ -1.53
HMCN1Q96RW7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC5.46□□□□□ -1.53
HMCN1Q96RW7 LINC01225-203ENST00000563550 1244 ntBASIC5.46□□□□□ -1.53
HMCN1Q96RW7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC5.46□□□□□ -1.53
HMCN1Q96RW7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.53
HMCN1Q96RW7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC5.46□□□□□ -1.53
HMCN1Q96RW7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms