Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PKNOX2Q96KN3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.63■□□□□ 0.73
PKNOX2Q96KN3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.63■□□□□ 0.73
PKNOX2Q96KN3 TERF1P2-201ENST00000583350 1212 ntBASIC19.63■□□□□ 0.73
PKNOX2Q96KN3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
PKNOX2Q96KN3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.63■□□□□ 0.73
PKNOX2Q96KN3 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PKNOX2Q96KN3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PKNOX2Q96KN3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PKNOX2Q96KN3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PKNOX2Q96KN3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PKNOX2Q96KN3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PKNOX2Q96KN3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PKNOX2Q96KN3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PKNOX2Q96KN3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.63■□□□□ 0.73
PKNOX2Q96KN3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PKNOX2Q96KN3 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC19.63■□□□□ 0.73
PKNOX2Q96KN3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.63■□□□□ 0.73
PKNOX2Q96KN3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PKNOX2Q96KN3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PKNOX2Q96KN3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PKNOX2Q96KN3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PKNOX2Q96KN3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 AL023775.1-201ENST00000454907 1746 ntBASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 AC138035.3-201ENST00000622706 2791 ntBASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 AC106881.1-201ENST00000605849 3329 ntBASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PKNOX2Q96KN3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 AC142381.2-201ENST00000566120 298 ntBASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.61■□□□□ 0.73
PKNOX2Q96KN3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.6■□□□□ 0.73
PKNOX2Q96KN3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKNOX2Q96KN3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.6■□□□□ 0.73
PKNOX2Q96KN3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKNOX2Q96KN3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PKNOX2Q96KN3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKNOX2Q96KN3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC19.6■□□□□ 0.73
PKNOX2Q96KN3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PKNOX2Q96KN3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKNOX2Q96KN3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKNOX2Q96KN3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PKNOX2Q96KN3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PKNOX2Q96KN3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms